RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 RPS18P62269 152 aaKnown RBP12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 PHC1P78364 1004 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 RCAN2Q14206 197 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 NSDHLQ15738 373 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 OR4F3Q6IEY1 312 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 TREML1Q86YW5 311 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 SAMD14Q8IZD0 417 aaPredicted RBP12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 FITM2Q8N6M3 262 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 FGF11Q92914 225 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 VPS33AQ96AX1 596 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 ERP27Q96DN0 273 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 SPDL1Q96EA4 605 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 BBS4Q96RK4 519 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 FAM117AQ9C073 453 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 BHLHE41Q9C0J9 482 aaPredicted RBP12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 WDR70Q9NW82 654 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 KCND3Q9UK17 655 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 ENTPD4Q9Y227 616 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 APC2O95996 2303 aa12.87□□□□□ -0.35
TUBA1B-202ENST00000336023 CAPN14A8MX76 684 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 PDPK1O15530 556 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 ALOX12BO75342 701 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 UMODP07911 640 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 CYC1P08574 325 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 CPMP14384 443 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 PORP16435 677 aaPredicted RBP12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 CSNK2A2P19784 350 aaPredicted RBP12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 EFNA1P20827 205 aaPredicted RBP12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 FOLR3P41439 243 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 WNT3P56703 355 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 PCBP4P57723 403 aaKnown RBP12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 IGLV3-21P80748 117 aaPredicted RBP12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 SERTAD2Q14140 314 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 VPS26BQ4G0F5 336 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 TIGD2Q4W5G0 525 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 FAAH2Q6GMR7 532 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 CCDC116Q8IYX3 515 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 NATD1Q8N6N6 113 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 METTL21AQ8WXB1 218 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 OR52E6Q96RD3 313 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 GPN2Q9H9Y4 310 aaPredicted RBP12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 SLAMF7Q9NQ25 335 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 ANGPTL2Q9UKU9 493 aa12.86□□□□□ -0.35
TUBA1B-202ENST00000336023 LOC100653049A0A140TA62 436 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 PRSS51A0A1B0GVH4 220 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 TCRBV16S1A1N1A0A5B0 115 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 CCDC154A6NI56 674 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 MYO1GB0I1T2 1018 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 SCN2BO60939 215 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 KRT34O76011 436 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 SNRPB2P08579 225 aaKnown RBP12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 SLC35E2P0CK97 266 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 CAPN3P20807 821 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 NTSP30990 170 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 MPIP34949 423 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 DUSP2Q05923 314 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 BIKQ13323 160 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 TERF2Q15554 542 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 CEBPEQ15744 281 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 ANXA8L1Q5VT79 327 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 LANCL3Q6ZV70 420 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 LRRC25Q8N386 305 aaPredicted RBP12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 KIAA1143Q96AT1 154 aaPredicted RBP12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 PPWD1Q96BP3 646 aaKnown RBP12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 ZBED6CLQ96FA7 236 aaPredicted RBP12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 RBM18Q96H35 190 aaKnown RBP12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 SLC52A3Q9NQ40 469 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 SEMA3GQ9NS98 782 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 FAM120CQ9NX05 1096 aaKnown RBP12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 IL17BQ9UHF5 180 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 PCDHGA6Q9Y5G7 932 aa12.85□□□□□ -0.35
TUBA1B-202ENST00000336023 A0A1W2PP18 115 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 A0A1W2PRB8 838 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 DYTNA2CJ06 578 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 RNASET2O00584 256 aaKnown RBP12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 CFLARO15519 480 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 TLX3O43711 291 aaPredicted RBP12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 OR10H2O60403 315 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 IFNA16P05015 189 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 LIFP15018 202 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 FRKP42685 505 aaPredicted RBP12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 NCBP2P52298 156 aaKnown RBP eCLIP12.84□□□□□ -0.355e-31■■□□□ 13.4
TUBA1B-202ENST00000336023 MANFP55145 182 aaKnown RBP12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 CLN3Q13286 438 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 MAPRE2Q15555 327 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 FAM91A1Q658Y4 838 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 TMEM205Q6UW68 189 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 TRPM8Q7Z2W7 1104 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 VASH2Q86V25 355 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 ANKRD46Q86W74 232 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 SNX32Q86XE0 403 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 ST13P4Q8IZP2 240 aaPredicted RBP12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 C7orf57Q8NEG2 295 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 VPS37AQ8NEZ2 397 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 SUN3Q8TAQ9 357 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 TSPEARQ8WU66 669 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 NAF1Q96HR8 494 aaKnown RBP12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 AMDHD1Q96NU7 426 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 DGAT2Q96PD7 388 aa12.84□□□□□ -0.35
TUBA1B-202ENST00000336023 MESP1Q9BRJ9 268 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms