RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 SLC35G4P0C7Q5 338 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 CD40LGP29965 261 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 SSR2P43308 183 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 CCT3P49368 545 aaKnown RBP14.08□□□□□ -0.15
UBA1-201ENST00000335972 CRISP1P54107 249 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 RAB8AP61006 207 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 HOXC5Q00444 222 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 FRMPD2BQ6IN97 320 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 TCTN3Q6NUS6 607 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 PSRC1Q6PGN9 363 aaPredicted RBP14.08□□□□□ -0.15
UBA1-201ENST00000335972 TRIM73Q86UV7 250 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 OR8K5Q8NH50 307 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 WFIKKN2Q8TEU8 576 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 VMP1Q96GC9 406 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 FCRL4Q96PJ5 515 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 INSM2Q96T92 566 aaPredicted RBP14.08□□□□□ -0.15
UBA1-201ENST00000335972 DPH7Q9BTV6 452 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 AICDAQ9GZX7 198 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 SIRT3Q9NTG7 399 aaPredicted RBP14.08□□□□□ -0.15
UBA1-201ENST00000335972 SEC14L3Q9UDX4 400 aa14.08□□□□□ -0.15
UBA1-201ENST00000335972 A8MU76 341 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 C4orf51C9J302 202 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 EIF2B2P49770 351 aaKnown RBP14.08□□□□□ -0.16
UBA1-201ENST00000335972 TAS2R38P59533 333 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 CDC42P60953 191 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 PCDH1Q08174 1060 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 RBBP4Q09028 425 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 KRT33BQ14525 404 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 ZNF404Q494X3 552 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 SLC46A3Q7Z3Q1 461 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 FBXO15Q8NCQ5 510 aaPredicted RBP14.08□□□□□ -0.16
UBA1-201ENST00000335972 TMIEQ8NEW7 156 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 HPS1Q92902 700 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 PPP1R16AQ96I34 528 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 OR51I1Q9H343 314 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 SYNPO2LQ9H987 977 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 THSD1Q9NS62 852 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 IFT52Q9Y366 437 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 PGRMC2O15173 223 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 NDUFS4O43181 175 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 CYP7B1O75881 506 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 RB1P06400 928 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 RGS6P49758 472 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 CCR8P51685 355 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 TARDBPQ13148 414 aaKnown RBP eCLIP14.08□□□□□ -0.163e-7■■■□□ 16.8
UBA1-201ENST00000335972 PIP5KL1Q5T9C9 394 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 LCTLQ6UWM7 567 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 ZNF793Q6ZN11 406 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 TCEANCQ8N8B7 351 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 C16orf58Q96GQ5 468 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 TPK1Q9H3S4 243 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 ZCCHC3Q9NUD5 404 aaKnown RBP14.08□□□□□ -0.16
UBA1-201ENST00000335972 AHSPQ9NZD4 102 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 SPATA7Q9P0W8 599 aa14.08□□□□□ -0.16
UBA1-201ENST00000335972 A0A1W2PPV9 198 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 PDZK1P1A8MUH7 402 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 CAPN5O15484 640 aaPredicted RBP14.07□□□□□ -0.16
UBA1-201ENST00000335972 IFNA14P01570 189 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 NR2F1P10589 423 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 ALOX12P18054 663 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 RHCEP18577 417 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 DRD3P35462 400 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 DUSP2Q05923 314 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 MLF2Q15773 248 aaPredicted RBP14.07□□□□□ -0.16
UBA1-201ENST00000335972 CCDC116Q8IYX3 515 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 SLC34A3Q8N130 599 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 CYP4Z2PQ8N1L4 340 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 OR5K2Q8NHB8 316 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 SMPDL3AQ92484 453 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 UBE2E3Q969T4 207 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 MROQ9BYG7 248 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 PALMDQ9NP74 551 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 CHCHD3Q9NX63 227 aaKnown RBP14.07□□□□□ -0.16
UBA1-201ENST00000335972 TVP23BQ9NYZ1 205 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 TMCC3Q9ULS5 477 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 SLC27A6Q9Y2P4 619 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 IGKV1-8A0A0C4DH67 115 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 SERPINB7O75635 380 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 MFN2O95140 757 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 ATXN8OSP0DMR3 200 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 LASP1Q14847 261 aaKnown RBP14.07□□□□□ -0.16
UBA1-201ENST00000335972 TBCEQ15813 527 aaPredicted RBP14.07□□□□□ -0.16
UBA1-201ENST00000335972 SHISA5Q8N114 240 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 ARSGQ96EG1 525 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 TREX2Q9BQ50 279 aaPredicted RBP14.07□□□□□ -0.16
UBA1-201ENST00000335972 CNPPD1Q9BV87 410 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 FTSJ1Q9UET6 329 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 GPR34Q9UPC5 381 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 KCNE3Q9Y6H6 103 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 E9PQ18 207 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 NFATC1O95644 943 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 CA3P07451 260 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 SPNP16150 400 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 BUD31P41223 144 aaPredicted RBP14.07□□□□□ -0.16
UBA1-201ENST00000335972 NCBP2P52298 156 aaKnown RBP eCLIP14.07□□□□□ -0.161e-6■■□□□ 11.8
UBA1-201ENST00000335972 SNRPNP63162 240 aaKnown RBP14.07□□□□□ -0.16
UBA1-201ENST00000335972 FGL2Q14314 439 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 NDUFAF5Q5TEU4 345 aa14.07□□□□□ -0.16
UBA1-201ENST00000335972 TP53I13Q8NBR0 393 aaPredicted RBP14.07□□□□□ -0.16
UBA1-201ENST00000335972 PDXPQ96GD0 296 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms