RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 TMEM236Q5W0B7 351 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 TCTN3Q6NUS6 607 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 BTLAQ7Z6A9 289 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 ZBTB46Q86UZ6 589 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 MMAAQ8IVH4 418 aaKnown RBP10.19□□□□□ -0.78
CCDC172-201ENST00000333254 B3GNT7Q8NFL0 401 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 OR2L8Q8NGY9 312 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 OR52J3Q8NH60 311 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 F2RL3Q96RI0 385 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 FAIM2Q9BWQ8 316 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 TAPBPLQ9BX59 468 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 SORBS1Q9BX66 1292 aaKnown RBP10.19□□□□□ -0.78
CCDC172-201ENST00000333254 CUEDC1Q9NWM3 386 aaPredicted RBP10.19□□□□□ -0.78
CCDC172-201ENST00000333254 MS4A12Q9NXJ0 267 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 GPR83Q9NYM4 423 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 CFL2Q9Y281 166 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 IFT52Q9Y366 437 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 PCYT1BQ9Y5K3 369 aaPredicted RBP10.19□□□□□ -0.78
CCDC172-201ENST00000333254 PEX16Q9Y5Y5 336 aa10.19□□□□□ -0.78
CCDC172-201ENST00000333254 A0A075B6Q4 140 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 TRBV4-1A0A0J9YWV2 114 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 KRBA1A5PL33 1030 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 TLR4O00206 839 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 TOR1BO14657 336 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 CASC3O15234 703 aaKnown RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 B4GALT2O60909 372 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 UPK1BO75841 260 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 ADH1BP00325 375 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 PTHP01270 115 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 PPP2R1BP30154 601 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 PKLRP30613 574 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 AHRP35869 848 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 OPRD1P41143 372 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 CCT3P49368 545 aaKnown RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 KHKP50053 298 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 RAB28P51157 221 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 PSMD7P51665 324 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 LSM3P62310 102 aaKnown RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 IFITM3Q01628 133 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 KRR1Q13601 381 aaKnown RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 NCF4Q15080 339 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 WSCD2Q2TBF2 565 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 AGBL4Q5VU57 503 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 OR4C11Q6IEV9 310 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 BHLHB9Q6PI77 547 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 FBXO46Q6PJ61 603 aaPredicted RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 PTCHD4Q6ZW05 846 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 UBE3DQ7Z6J8 389 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 KRT73Q86Y46 540 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 MMP21Q8N119 569 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 TBC1D19Q8N5T2 526 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 ZBTB8BQ8NAP8 495 aaPredicted RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 OR8J1Q8NGP2 316 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 CREB3L4Q8TEY5 395 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 FAM131CQ96AQ9 280 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 SLC35G5Q96KT7 338 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 RSPH9Q9H1X1 276 aaPredicted RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 MVB12BQ9H7P6 319 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 IRAK4Q9NWZ3 460 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 TMEM98Q9Y2Y6 226 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 MDC1Q14676 2089 aaKnown RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 DOCK8Q8NF50 2099 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 PNMA8CA0A1B0GUJ8 204 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 OTOL1A6NHN0 477 aaPredicted RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 CCRL2O00421 344 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 SYT5O00445 386 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 DSCR3O14972 297 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 ZW10O43264 779 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 TMPRSS11DO60235 418 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 C5AR1P21730 350 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 CNR2P34972 360 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 CASP9P55211 416 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 TAS2R38P59533 333 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 MRM1Q6IN84 353 aaKnown RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 PGBD2Q6P3X8 592 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 ATCAYQ86WG3 371 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 TRIM69Q86WT6 500 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 GJD3Q8N144 294 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 LMNTD1Q8N9Z9 388 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 LINC01555Q8NAE3 123 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 GTPBP3Q969Y2 492 aaKnown RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 MGLLQ99685 303 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 CDADC1Q9BWV3 514 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 POLDIP3Q9BY77 421 aaKnown RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 SERHL2Q9H4I8 314 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 SFXN1Q9H9B4 322 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 ZBTB20Q9HC78 741 aaPredicted RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 PHPT1Q9NRX4 125 aaPredicted RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 SEMA3GQ9NS98 782 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 SELENONQ9NZV5 590 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 PLAGL1Q9UM63 463 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 LSM2Q9Y333 95 aaKnown RBP10.18□□□□□ -0.78
CCDC172-201ENST00000333254 SNX8Q9Y5X2 465 aa10.18□□□□□ -0.78
CCDC172-201ENST00000333254 SNRNP200O75643 2136 aaKnown RBP10.17□□□□□ -0.78
CCDC172-201ENST00000333254 LRIT2A6NDA9 550 aa10.17□□□□□ -0.78
CCDC172-201ENST00000333254 ANHXE9PGG2 379 aa10.17□□□□□ -0.78
CCDC172-201ENST00000333254 BOLA2-SMG1P6H3BVE0 249 aa10.17□□□□□ -0.78
CCDC172-201ENST00000333254 RTCAO00442 366 aaKnown RBP10.17□□□□□ -0.78
CCDC172-201ENST00000333254 ZSCAN9O15535 394 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms