RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ETV5P41161 510 aa22.45■■□□□ 1.18
TSKU-201ENST00000333090 ETV1P50549 477 aa22.45■■□□□ 1.18
TSKU-201ENST00000333090 CAV3P56539 151 aa22.45■■□□□ 1.18
TSKU-201ENST00000333090 REPS1Q96D71 796 aa22.45■■□□□ 1.18
TSKU-201ENST00000333090 KCTD7Q96MP8 289 aa22.45■■□□□ 1.18
TSKU-201ENST00000333090 GON7Q9BXV9 100 aa22.45■■□□□ 1.18
TSKU-201ENST00000333090 HCN2Q9UL51 889 aa22.45■■□□□ 1.18
TSKU-201ENST00000333090 PRRC2BQ5JSZ5 2229 aaKnown RBP22.45■■□□□ 1.18
TSKU-201ENST00000333090 A0A0G2JMP0 313 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 PRKYO43930 277 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 APEX1P27695 318 aaKnown RBP22.44■■□□□ 1.18
TSKU-201ENST00000333090 PBLDP30039 288 aaPredicted RBP22.44■■□□□ 1.18
TSKU-201ENST00000333090 ERP29P30040 261 aaKnown RBP22.44■■□□□ 1.18
TSKU-201ENST00000333090 CTSCP53634 463 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 LCN1P1Q5VSP4 162 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 FAM71E1Q6IPT2 247 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 FAM92BQ6ZTR7 304 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 METTL3Q86U44 580 aaKnown RBP22.44■■□□□ 1.18
TSKU-201ENST00000333090 PEX5LQ8IYB4 626 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 NLGN4YQ8NFZ3 816 aaPredicted RBP22.44■■□□□ 1.18
TSKU-201ENST00000333090 GPR32P1Q8NGA4 272 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 APOBEC4Q8WW27 367 aaKnown RBP22.44■■□□□ 1.18
TSKU-201ENST00000333090 SLC6A16Q9GZN6 736 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 ANKRA2Q9H9E1 313 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 MIEF1Q9NQG6 463 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 TOR4AQ9NXH8 423 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 DOCK6Q96HP0 2047 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 IL3P08700 152 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 TM4SF4P48230 202 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 WDR5P61964 334 aaKnown RBP22.44■■□□□ 1.18
TSKU-201ENST00000333090 GPR19Q15760 415 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 FLYWCH1Q4VC44 716 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 HSD11B1LQ7Z5J1 315 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 OR52I1Q8NGK6 324 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 CD99L2Q8TCZ2 262 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 SLC38A5Q8WUX1 472 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 TRMT2BQ96GJ1 504 aaKnown RBP22.44■■□□□ 1.18
TSKU-201ENST00000333090 NLNQ9BYT8 704 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 ELAC1Q9H777 363 aaKnown RBP22.44■■□□□ 1.18
TSKU-201ENST00000333090 CXorf36Q9H7Y0 433 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 COMMD3Q9UBI1 195 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 SEC14L5O43304 696 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 H1F0P07305 194 aaKnown RBP22.44■■□□□ 1.18
TSKU-201ENST00000333090 PDHA2P29803 388 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 TBPL1P62380 186 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 UAP1L1Q3KQV9 507 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 OR2G6Q5TZ20 316 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 PGBD2Q6P3X8 592 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 HSDL2Q6YN16 418 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 ABI3BPQ7Z7G0 1075 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 PDZD3Q86UT5 571 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 LAPTM4BQ86VI4 370 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 CHST14Q8NCH0 376 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 ZFAND1Q8TCF1 268 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 KATNB1Q9BVA0 655 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 RSPO3Q9BXY4 272 aaPredicted RBP22.44■■□□□ 1.18
TSKU-201ENST00000333090 DMRT3Q9NQL9 472 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 CLCA3PQ9Y6N3 262 aa22.44■■□□□ 1.18
TSKU-201ENST00000333090 ZNF780AO75290 641 aaPredicted RBP22.43■■□□□ 1.18
TSKU-201ENST00000333090 RPL3P39023 403 aaKnown RBP22.43■■□□□ 1.18
TSKU-201ENST00000333090 ETV3P41162 512 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 MAN2A2P49641 1150 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 P2RX3P56373 397 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 RPS25P62851 125 aaKnown RBP22.43■■□□□ 1.18
TSKU-201ENST00000333090 HORMAD2Q8N7B1 307 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 C19orf18Q8NEA5 215 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 RAB8BQ92930 207 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 SNAPC3Q92966 411 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 TM9SF2Q99805 663 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 MYNNQ9NPC7 610 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 SEMA3GQ9NS98 782 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 DNMT3AQ9Y6K1 912 aaPredicted RBP22.43■■□□□ 1.18
TSKU-201ENST00000333090 TRAV19A0A0A6YYK7 116 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 PRRG1O14668 218 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 NPC1O15118 1278 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 SH3BP5O60239 455 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 KLHL18O94889 574 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 RAB36O95755 333 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 SLC2A2P11168 524 aaPredicted RBP22.43■■□□□ 1.18
TSKU-201ENST00000333090 CPEP16870 476 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 CPN2P22792 545 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 HLA-DMAP28067 261 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 MAP2K3P46734 347 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 DGKGP49619 791 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 CRTC2Q53ET0 693 aaPredicted RBP22.43■■□□□ 1.18
TSKU-201ENST00000333090 TRIQKQ629K1 86 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 RFPL4BQ6ZWI9 263 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 TCTE3Q8IZS6 198 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 OR52P1PQ8NH57 321 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 TMEM19Q96HH6 336 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 LRR1Q96L50 414 aa22.43■■□□□ 1.18
TSKU-201ENST00000333090 SORBS1Q9BX66 1292 aaKnown RBP22.43■■□□□ 1.18
TSKU-201ENST00000333090 LSM7Q9UK45 103 aaKnown RBP22.43■■□□□ 1.18
TSKU-201ENST00000333090 DIMT1Q9UNQ2 313 aaKnown RBP22.43■■□□□ 1.18
TSKU-201ENST00000333090 A0A0X1KG70 313 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 ANKDD1BA6NHY2 528 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 FAAHO00519 579 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 ALAS2P22557 587 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 NPAS4Q8IUM7 802 aa22.42■■□□□ 1.18
TSKU-201ENST00000333090 TP53I13Q8NBR0 393 aaPredicted RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms