RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 BIKQ13323 160 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 KIAA0040Q15053 153 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 LINC00696Q6ZRV3 163 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 ST13P4Q8IZP2 240 aaPredicted RBP14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 KIRREL3Q8IZU9 778 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 KIF2BQ8N4N8 673 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 B3GNT7Q8NFL0 401 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 OR4K14Q8NGD5 310 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 PTPMT1Q8WUK0 201 aaPredicted RBP14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 DYDC1Q8WWB3 177 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 PSMF1Q92530 271 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 DAZLQ92904 295 aaKnown RBP14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 NCLNQ969V3 563 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 KLHL29Q96CT2 875 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 RBM18Q96H35 190 aaKnown RBP14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 PPP3R2Q96LZ3 170 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 CCT7Q99832 543 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 PFDN4Q9NQP4 134 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 HEY2Q9UBP5 337 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 HAO1Q9UJM8 370 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 PCDHGB7Q9Y5F8 929 aa14.84□□□□□ -0.03
CCDC28A-201ENST00000332797 PEX11AO75192 247 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 ERAL1O75616 437 aaKnown RBP14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 DRD2P14416 443 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 GSTM5P46439 218 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 NFATC3Q12968 1075 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 HEPACAMQ14CZ8 416 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 ATP6AP1LQ52LC2 224 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 RFTN2Q52LD8 501 aaPredicted RBP14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 CRB2Q5IJ48 1285 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 B3GNTL1Q67FW5 361 aaPredicted RBP14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 FCRLBQ6BAA4 426 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 ISLR2Q6UXK2 745 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 DGAT2L6Q6ZPD8 337 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 PTRH1Q86Y79 214 aaKnown RBP14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 ELP5Q8TE02 316 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 ZNF75CPQ92670 426 aaPredicted RBP14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 TUBGCP3Q96CW5 907 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 PELOQ9BRX2 385 aaKnown RBP14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 OR8D2Q9GZM6 311 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 ZBTB20Q9HC78 741 aaPredicted RBP14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 MYNNQ9NPC7 610 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 UTS2RQ9UKP6 389 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 CES1P1Q9UKY3 287 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 TMED5Q9Y3A6 229 aa14.83□□□□□ -0.03
CCDC28A-201ENST00000332797 TRBV11-1A0A0K0K1C0 115 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 DYRK3O43781 588 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 SLC35E2P0CK97 266 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 TACR1P25103 407 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 SOX11P35716 441 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 XKP51811 444 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 OCRLQ01968 901 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 C2orf80Q0P641 193 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 ZNF750Q32MQ0 723 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 FAM180BQ6P0A1 224 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 APCDD1LQ8NCL9 501 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 MORN4Q8NDC4 146 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 SLC2A12Q8TD20 617 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 LRRC8CQ8TDW0 803 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 DOK4Q8TEW6 326 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 VMP1Q96GC9 406 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 FCRL1Q96LA6 429 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 EPS8L2Q9H6S3 715 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 INTS9Q9NV88 658 aaKnown RBP14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 MARCOQ9UEW3 520 aaPredicted RBP14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 PSME2Q9UL46 239 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 DOCK10Q96BY6 2186 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 DYNC1I1O14576 645 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 KLF11O14901 512 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 DDAH2O95865 285 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 KITP10721 976 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 CPMP14384 443 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 PORP16435 677 aaPredicted RBP14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 SDC1P18827 310 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 FEN1P39748 380 aaKnown RBP14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 CLCN2P51788 898 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 HK2P52789 917 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 MFAP5Q13361 173 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 HSP90B2PQ58FF3 399 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 ABHD17BQ5VST6 288 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 FAM71E1Q6IPT2 247 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 ZNF321PQ8N8H1 164 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 FNDC5Q8NAU1 212 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 CLHC1Q8NHS4 586 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 TM9SF4Q92544 642 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 RIT1Q92963 219 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 EXOSC8Q96B26 276 aaKnown RBP14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 TSSK3Q96PN8 268 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 C1orf50Q9BV19 199 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 DEFB126Q9BYW3 111 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 NUF2Q9BZD4 464 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 MIEF1Q9NQG6 463 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 TEKT2Q9UIF3 430 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 PPIEQ9UNP9 301 aaKnown RBP14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 ZNF780BQ9Y6R6 833 aa14.82□□□□□ -0.04
CCDC28A-201ENST00000332797 SMG1Q96Q15 3661 aaKnown RBP14.81□□□□□ -0.04
CCDC28A-201ENST00000332797 DPM1O60762 260 aa14.81□□□□□ -0.04
CCDC28A-201ENST00000332797 DDCP20711 480 aa14.81□□□□□ -0.04
CCDC28A-201ENST00000332797 MAPK1P28482 360 aa14.81□□□□□ -0.04
CCDC28A-201ENST00000332797 GPR143P51810 404 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms