RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 MAPKAPK2P49137 400 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 ILKQ13418 452 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 HEPACAMQ14CZ8 416 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 OCLNQ16625 522 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 GDF6Q6KF10 455 aaPredicted RBP23.17■■□□□ 1.3
SOX1-201ENST00000330949 TFAP2EQ6VUC0 442 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 CERS6Q6ZMG9 384 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 CINPQ9BW66 212 aaPredicted RBP23.17■■□□□ 1.3
SOX1-201ENST00000330949 SLC6A15Q9H2J7 730 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 ZNF304Q9HCX3 659 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 SF3B6Q9Y3B4 125 aaKnown RBP23.17■■□□□ 1.3
SOX1-201ENST00000330949 HRH3Q9Y5N1 445 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 ACTL7AQ9Y615 435 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 TNFRSF10BO14763 440 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 YY2O15391 372 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 ANXA5P08758 320 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 C1SP09871 688 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 DNASE1P24855 282 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 GRK4P32298 578 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 TPBGQ13641 420 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 TUSC1Q2TAM9 212 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 FCRL1Q96LA6 429 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 LDAHQ9H6V9 325 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 ENPP4Q9Y6X5 453 aa23.17■■□□□ 1.3
SOX1-201ENST00000330949 RHCEP18577 417 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 GABRA5P31644 462 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 CRATP43155 626 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 FAM110CQ1W6H9 321 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 ZNF770Q6IQ21 691 aaPredicted RBP23.16■■□□□ 1.3
SOX1-201ENST00000330949 MBOAT1Q6ZNC8 495 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 CDC26Q8NHZ8 85 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 GTF3C2Q8WUA4 911 aaPredicted RBP23.16■■□□□ 1.3
SOX1-201ENST00000330949 ABCG5Q9H222 651 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 LATS2Q9NRM7 1088 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 SDHAF2Q9NX18 166 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 MYO16Q9Y6X6 1858 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 KCNE1BA0A087WTH5 132 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 DRGXA6NNA5 263 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 M0R233 179 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 CFDP00746 253 aaPredicted RBP23.16■■□□□ 1.3
SOX1-201ENST00000330949 NNMTP40261 264 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 C12orf73Q69YU5 71 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 ANGPTL8Q6UXH0 198 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 CHMP1BQ7LBR1 199 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 OTULINQ96BN8 352 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 PDXPQ96GD0 296 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 PARK7Q99497 189 aaKnown RBP23.16■■□□□ 1.3
SOX1-201ENST00000330949 MCCC2Q9HCC0 563 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 NUDT15Q9NV35 164 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 KCMF1Q9P0J7 381 aa23.16■■□□□ 1.3
SOX1-201ENST00000330949 EXO1Q9UQ84 846 aaKnown RBP23.16■■□□□ 1.3
SOX1-201ENST00000330949 GLYATL1P3A0A0U1RQE8 302 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 KRBOX1C9JBD0 128 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 IFNA14P01570 189 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 ETV5P41161 510 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 EFEMP1Q12805 493 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 CAMK2DQ13557 499 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 DSG2Q14126 1118 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 ARHGAP15Q53QZ3 475 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 RASGRP3Q8IV61 690 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 OR52I1Q8NGK6 324 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 WBP1Q96G27 269 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 TMEM175Q9BSA9 504 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 TMEM168Q9H0V1 697 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 ANKRD66B4E2M5 251 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 SLC25A14O95258 325 aaPredicted RBP23.15■■□□□ 1.3
SOX1-201ENST00000330949 TRBC1P01850 177 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 CXCL3P19876 107 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 THPOP40225 353 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 FOXD4Q12950 439 aaPredicted RBP23.15■■□□□ 1.3
SOX1-201ENST00000330949 GAB1Q13480 694 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 LEXMQ3ZCV2 418 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 SPIN4Q56A73 249 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 TCEANCQ8N8B7 351 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 ADGRE3Q9BY15 652 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 RBCK1Q9BYM8 510 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 ISYNA1Q9NPH2 558 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 BAIAP2Q9UQB8 552 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 PTPRDP23468 1912 aa23.15■■□□□ 1.3
SOX1-201ENST00000330949 TRAV6A0A075B6T7 132 aa23.14■■□□□ 1.3
SOX1-201ENST00000330949 PROS1P07225 676 aa23.14■■□□□ 1.3
SOX1-201ENST00000330949 RGRP47804 291 aa23.14■■□□□ 1.3
SOX1-201ENST00000330949 C21orf58P58505 322 aa23.14■■□□□ 1.3
SOX1-201ENST00000330949 FABP5Q01469 135 aa23.14■■□□□ 1.3
SOX1-201ENST00000330949 MAP2K5Q13163 448 aa23.14■■□□□ 1.3
SOX1-201ENST00000330949 SCARB2Q14108 478 aa23.14■■□□□ 1.3
SOX1-201ENST00000330949 NPAS3Q8IXF0 933 aa23.14■■□□□ 1.3
SOX1-201ENST00000330949 ZBTB2Q8N680 514 aa23.14■■□□□ 1.3
SOX1-201ENST00000330949 ERMAPQ96PL5 475 aaPredicted RBP23.14■■□□□ 1.3
SOX1-201ENST00000330949 PKMYT1Q99640 499 aa23.14■■□□□ 1.3
SOX1-201ENST00000330949 REV1Q9UBZ9 1251 aa23.14■■□□□ 1.3
SOX1-201ENST00000330949 ZNF282Q9UDV7 671 aaPredicted RBP23.14■■□□□ 1.3
SOX1-201ENST00000330949 PIPSLA2A3N6 862 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 H3BN98 237 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 LALBAP00709 142 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 DCDC1P59894 354 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 CSTF1Q05048 431 aaKnown RBP23.14■■□□□ 1.29
SOX1-201ENST00000330949 CYP27C1Q4G0S4 372 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 HSD17B12Q53GQ0 312 aa23.14■■□□□ 1.29
SOX1-201ENST00000330949 RFT1Q96AA3 541 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms