RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 CASP9P55211 416 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 RPS4XP62701 263 aaKnown RBP13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 SKP1P63208 163 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 KCNJ2P63252 427 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 DEFA6Q01524 100 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 FRG1Q14331 258 aaKnown RBP13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 TMEM249Q2WGJ8 235 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 DEFB134Q4QY38 66 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 MSS51Q4VC12 460 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 HP1BP3Q5SSJ5 553 aaPredicted RBP13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 ADGRD1Q6QNK2 874 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 OPN5Q6U736 354 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 AGGF1Q8N302 714 aaeCLIP13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 ZNF611Q8N823 705 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 PYROXD1Q8WU10 500 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 ART5Q96L15 291 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 ZFP3Q96NJ6 502 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 QRFPRQ96P65 431 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 DPH5Q9H2P9 285 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 NSMCE4AQ9NXX6 385 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 CORO1CQ9ULV4 474 aaPredicted RBP13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 LAMP3Q9UQV4 416 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 DHRS7Q9Y394 339 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 TEX264Q9Y6I9 313 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 NINQ8N4C6 2090 aa13.49□□□□□ -0.25
CTHRC1-201ENST00000330295 MED12LQ86YW9 2145 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 C2orf72A6NCS6 295 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 RAD51CO43502 376 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 ZNF354AO60765 605 aaPredicted RBP13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 BANF1O75531 89 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 SLC16A8O95907 504 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 HRH2P25021 359 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 MGAT5Q09328 741 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 KLHL38Q2WGJ6 581 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 ACSBG2Q5FVE4 666 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 THEMIS2Q5TEJ8 643 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 STEAP4Q687X5 459 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 VASNQ6EMK4 673 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 C8orf74Q6P047 294 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 ZNF704Q6ZNC4 412 aaPredicted RBP13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 ZNF572Q7Z3I7 529 aaPredicted RBP13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 GALNT7Q86SF2 657 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 ANKMY2Q8IV38 441 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 CNTN4Q8IWV2 1026 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 ZBED8Q8IZ13 594 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 ARIH2OSQ8N7S6 290 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 ZNF740Q8NDX6 193 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 FBXO36Q8NEA4 188 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 ZNF480Q8WV37 535 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 CDKL2Q92772 493 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 ZC3HAV1LQ96H79 300 aaKnown RBP13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 PKP4Q99569 1192 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 FAM129AQ9BZQ8 928 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 TXNDC16Q9P2K2 825 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 PACSIN3Q9UKS6 424 aa13.48□□□□□ -0.25
CTHRC1-201ENST00000330295 NBEAL2Q6ZNJ1 2754 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 OVOL3O00110 214 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 HS3ST1O14792 307 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 ZBTB14O43829 449 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 RCBTB2O95199 551 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 B3GALT4O96024 378 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 MPC1LP0DKB6 136 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 ALOX12P18054 663 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 GDF1P27539 372 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 SLCO1A2P46721 670 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 CLCN7P51798 805 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 VLDLRP98155 873 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 RCAN2Q14206 197 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 GBX1Q14549 363 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 TEDDM1Q5T9Z0 273 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 PRAMEF20Q5VT98 475 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 SLC22A10Q63ZE4 541 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 DUPD1Q68J44 220 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 CAPN13Q6MZZ7 669 aaPredicted RBP13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 HSDL2Q6YN16 418 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 IGDCC3Q8IVU1 814 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 KIF18AQ8NI77 898 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 SLC44A1Q8WWI5 657 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 ANKRD9Q96BM1 317 aaPredicted RBP13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 INTS12Q96CB8 462 aaKnown RBP13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 WDYHV1Q96HA8 205 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 JSRP1Q96MG2 331 aaPredicted RBP13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 GPR21Q99679 349 aa13.47□□□□□ -0.25
CTHRC1-201ENST00000330295 TRRAPQ9Y4A5 3859 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 A0A096LNT2 108 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 E7ESA3 106 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 PSMD12O00232 456 aaPredicted RBP13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 UBFD1O14562 309 aaKnown RBP13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 LCMT2O60294 686 aaKnown RBP13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 GSTA2P09210 222 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 RNH1P13489 461 aaKnown RBP13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 PPP2R1BP30154 601 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 CCKARP32238 428 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 CD79BP40259 229 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 PLTPP55058 493 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 MRPS25P82663 173 aaKnown RBP13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 NIPAL1Q6NVV3 410 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 ZNF549Q6P9A3 640 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 PLXDC2Q6UX71 529 aa13.46□□□□□ -0.25
CTHRC1-201ENST00000330295 SH2D5Q6ZV89 423 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms