RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 KCTD4Q8WVF5 259 aa16.36■□□□□ 0.21
PTPMT1-201ENST00000326656 MTERF1Q99551 399 aaKnown RBP16.36■□□□□ 0.21
PTPMT1-201ENST00000326656 DDX31Q9H8H2 851 aaKnown RBP16.36■□□□□ 0.21
PTPMT1-201ENST00000326656 KCNJ16Q9NPI9 418 aa16.36■□□□□ 0.21
PTPMT1-201ENST00000326656 CNIH4Q9P003 139 aa16.36■□□□□ 0.21
PTPMT1-201ENST00000326656 ATG4BQ9Y4P1 393 aa16.36■□□□□ 0.21
PTPMT1-201ENST00000326656 HCFC1P51610 2035 aa16.36■□□□□ 0.21
PTPMT1-201ENST00000326656 IQANK1A0A1B0GTG1 560 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 NPIPA2E9PIF3 369 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 NPIPA3F8WFD2 350 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 HCN1O60741 890 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 ZNF354AO60765 605 aaPredicted RBP16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 ACVR2AP27037 513 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 PHBP35232 272 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 GMPRP36959 345 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 FOLH1Q04609 750 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 PMPCAQ10713 525 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 DDX39BQ13838 428 aaKnown RBP16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 TRADDQ15628 312 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 SPRED3Q2MJR0 410 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 MROH9Q5TGP6 573 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 MRM1Q6IN84 353 aaKnown RBP16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 MYLK4Q86YV6 388 aaPredicted RBP16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 OR4N5Q8IXE1 308 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 L3MBTL4Q8NA19 623 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 PAQR8Q8TEZ7 354 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 SARAFQ96BY9 339 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 SMC6Q96SB8 1091 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 TSPYL1Q9H0U9 437 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 IPPKQ9H8X2 491 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 WDR41Q9HAD4 459 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 SH2D2AQ9NP31 389 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 SNX15Q9NRS6 342 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 ASB4Q9Y574 426 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 PCDHGB3Q9Y5G1 929 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 CELSR1Q9NYQ6 3014 aa16.35■□□□□ 0.21
PTPMT1-201ENST00000326656 HIVEP1P15822 2718 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 A0A096LPK6 155 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 A0A0G2JMM0 328 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 A0A1W2PPB8 328 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 A0A1W2PRS3 328 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 HMX2A2RU54 273 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 OR6C76A6NM76 312 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 KIR3DP1A8MWS1 328 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 WDR1O75083 606 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 SH3BGRLO75368 114 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 TOXO94900 526 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 SERPINB3P29508 390 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 TYK2P29597 1187 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 SERPINB8P50452 374 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 TLE4Q04727 773 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 GTF2H2Q13888 395 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 GTF2H2CQ6P1K8 395 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 SLC29A4Q7RTT9 530 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 RELL1Q8IUW5 271 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 C9orf40Q8IXQ3 194 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 OR5M3Q8NGP4 307 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 SPACA9Q96E40 222 aaPredicted RBP16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 GPR78Q96P69 363 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 SORBS1Q9BX66 1292 aaKnown RBP16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 ZNF717Q9BY31 904 aaPredicted RBP16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 PNPLA3Q9NST1 481 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 QPCTLQ9NXS2 382 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 TMCO1Q9UM00 188 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 BOKQ9UMX3 212 aaPredicted RBP16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 INTS1Q8N201 2190 aaKnown RBP16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 F8P00451 2351 aa16.34■□□□□ 0.21
PTPMT1-201ENST00000326656 CSMD2Q7Z408 3487 aa16.33■□□□□ 0.21
PTPMT1-201ENST00000326656 A0A0A6YYD5 115 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 FAM47E-STBD1D6RA91 191 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 G3V3Y1 287 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 SEMA3DO95025 777 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 CLDN9O95484 217 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 FBXO45P0C2W1 286 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 FAM58BPP0C7Q3 252 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 SLC35E2P0CK97 266 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 CCL3P10147 92 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 BSGP35613 385 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 MAGEA5P43359 124 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 MAN2A2P49641 1150 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 HNRNPH2P55795 449 aaKnown RBP16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 NUP107P57740 925 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 RPS13P62277 151 aaKnown RBP16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 CKAP4Q07065 602 aaKnown RBP16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 TFF3Q07654 80 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 CPSF6Q16630 551 aaKnown RBP eCLIP16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 C18orf63Q68DL7 685 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 CYP20A1Q6UW02 462 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 SYT10Q6XYQ8 523 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 B3GNT6Q6ZMB0 384 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 WDR20Q8TBZ3 569 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 RIT1Q92963 219 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 TP53INP1Q96A56 240 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 PPWD1Q96BP3 646 aaKnown RBP16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 SERPINI1Q99574 410 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 TTYH2Q9BSA4 534 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 ACSS3Q9H6R3 686 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 ZFP64Q9NPA5 681 aa16.33■□□□□ 0.2
PTPMT1-201ENST00000326656 ACKR4Q9NPB9 350 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms