RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 DTX3Q8N9I9 347 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 DRAXINQ8NBI3 349 aaPredicted RBP12.93□□□□□ -0.34
SRRM1-201ENST00000323848 OR1E3Q8WZA6 343 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 ANKRD60Q9BZ19 345 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 LHPPQ9H008 270 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 DZANK1Q9NVP4 752 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 ANKMY1Q9P2S6 941 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 URADA6NGE7 173 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 HAT1O14929 419 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 DUSP6Q16828 381 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 DUSP7Q16829 419 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 RNASE12Q5GAN4 147 aaKnown RBP12.93□□□□□ -0.34
SRRM1-201ENST00000323848 ZNF438Q7Z4V0 828 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 KLHDC8BQ8IXV7 354 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 SRFBP1Q8NEF9 429 aaKnown RBP12.93□□□□□ -0.34
SRRM1-201ENST00000323848 MCFD2Q8NI22 146 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 TEX47Q8TBZ9 253 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 KLHDC7BQ96G42 594 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 PNO1Q9NRX1 252 aaKnown RBP12.93□□□□□ -0.34
SRRM1-201ENST00000323848 KCMF1Q9P0J7 381 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 P2RX2Q9UBL9 471 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 MAPRE3Q9UPY8 281 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 NBASA2RRP1 2371 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 PRSS38A1L453 326 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 AREL1O15033 823 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 HOXC11O43248 304 aaPredicted RBP12.93□□□□□ -0.34
SRRM1-201ENST00000323848 AIREO43918 545 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 PDE9AO76083 593 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 NCS1P62166 190 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 KIAA1614Q5VZ46 1190 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 CDK20Q8IZL9 346 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 GEMIN6Q8WXD5 167 aaKnown RBP12.93□□□□□ -0.34
SRRM1-201ENST00000323848 SH3YL1Q96HL8 342 aaPredicted RBP12.93□□□□□ -0.34
SRRM1-201ENST00000323848 TBC1D17Q9HA65 648 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 SLC35C2Q9NQQ7 365 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 DDX28Q9NUL7 540 aaKnown RBP12.93□□□□□ -0.34
SRRM1-201ENST00000323848 MS4A12Q9NXJ0 267 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 PTTG2Q9NZH5 202 aa12.93□□□□□ -0.34
SRRM1-201ENST00000323848 RHPN2P1A8MT19 583 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 BOLA2-SMG1P6H3BVE0 249 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 SLC1A7O00341 560 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 GPR37L1O60883 481 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 PCYT1AP49585 367 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 DEFB133Q30KQ1 61 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 PACRGLQ8N7B6 248 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 NUP43Q8NFH3 380 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 OR5K2Q8NHB8 316 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 CNIH4Q9P003 139 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 APOBEC3BQ9UH17 382 aaKnown RBP12.92□□□□□ -0.34
SRRM1-201ENST00000323848 ATG4BQ9Y4P1 393 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 EPOPA6NHQ4 379 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 ZNF99A8MXY4 864 aaPredicted RBP12.92□□□□□ -0.34
SRRM1-201ENST00000323848 YY2O15391 372 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 SCN2BO60939 215 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 ALPLP05186 524 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 OCM2P0CE71 109 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 OCMP0CE72 109 aaPredicted RBP12.92□□□□□ -0.34
SRRM1-201ENST00000323848 NR2F6P10588 404 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 BMP7P18075 431 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 SLC9A3P48764 834 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 CLCN2P51788 898 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 ZNF267Q14586 743 aaPredicted RBP12.92□□□□□ -0.34
SRRM1-201ENST00000323848 PRSS36Q5K4E3 855 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 OR51A7Q8NH64 312 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 VWCEQ96DN2 955 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 PEX11GQ96HA9 241 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 POLE4Q9NR33 117 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 SNX7Q9UNH6 387 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 ST14Q9Y5Y6 855 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 DOCK9Q9BZ29 2069 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 CACNA1HO95180 2353 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 CHD5Q8TDI0 1954 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 SGK494L7N484 410 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 TFECO14948 347 aaPredicted RBP12.92□□□□□ -0.34
SRRM1-201ENST00000323848 KHNYNO15037 678 aaKnown RBP12.92□□□□□ -0.34
SRRM1-201ENST00000323848 TMPRSS11DO60235 418 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 TNFP01375 233 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 IGFBP1P08833 259 aaPredicted RBP12.92□□□□□ -0.34
SRRM1-201ENST00000323848 GKN3PP0CG01 181 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 MYF5P13349 255 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 SLC5A2P31639 672 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 PRDX1Q06830 199 aaKnown RBP12.92□□□□□ -0.34
SRRM1-201ENST00000323848 ST3GAL4Q11206 333 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 CBX3Q13185 183 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 NCF4Q15080 339 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 FBXL6Q8N531 539 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 OR56A3Q8NH54 315 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 RPL3LQ92901 407 aaKnown RBP12.92□□□□□ -0.34
SRRM1-201ENST00000323848 MYDGFQ969H8 173 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 SLC38A4Q969I6 547 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 MMABQ96EY8 250 aaPredicted RBP12.92□□□□□ -0.34
SRRM1-201ENST00000323848 COQ10AQ96MF6 247 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 FAM210AQ96ND0 272 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 VNN3Q9NY84 501 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 WDR45Q9Y484 360 aa12.92□□□□□ -0.34
SRRM1-201ENST00000323848 ARHGEF17Q96PE2 2063 aaPredicted RBP12.92□□□□□ -0.34
SRRM1-201ENST00000323848 LRRC37A2A6NM11 1700 aa12.91□□□□□ -0.34
SRRM1-201ENST00000323848 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.91□□□□□ -0.34
SRRM1-201ENST00000323848 H0YIV9 168 aa12.91□□□□□ -0.34
SRRM1-201ENST00000323848 HYAL3O43820 417 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms