RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 HMGA1P17096 107 aaKnown RBP14.58□□□□□ -0.08
VARS2-201ENST00000321897 IDSP22304 550 aa14.58□□□□□ -0.08
VARS2-201ENST00000321897 LHCGRP22888 699 aa14.58□□□□□ -0.08
VARS2-201ENST00000321897 EPHA2P29317 976 aa14.58□□□□□ -0.08
VARS2-201ENST00000321897 NRIP1P48552 1158 aa14.58□□□□□ -0.08
VARS2-201ENST00000321897 XKP51811 444 aa14.58□□□□□ -0.08
VARS2-201ENST00000321897 TEAD4Q15561 434 aa14.58□□□□□ -0.08
VARS2-201ENST00000321897 NNATQ16517 81 aa14.58□□□□□ -0.08
VARS2-201ENST00000321897 ATAT1Q5SQI0 421 aa14.58□□□□□ -0.08
VARS2-201ENST00000321897 MACC1Q6ZN28 852 aa14.58□□□□□ -0.08
VARS2-201ENST00000321897 YIPF7Q8N8F6 280 aa14.58□□□□□ -0.08
VARS2-201ENST00000321897 HMGCLL1Q8TB92 370 aa14.58□□□□□ -0.08
VARS2-201ENST00000321897 SLC35G5Q96KT7 338 aa14.58□□□□□ -0.08
VARS2-201ENST00000321897 IGLON5A6NGN9 336 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 OR52A4PA6NMU1 304 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 WWP2O00308 870 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 NFATC1O95644 943 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 PLATP00750 562 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 SSTR2P30874 369 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 GDI1P31150 447 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 MAN2A2P49641 1150 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 SPHARQ15513 63 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 TCEAL5Q5H9L2 206 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 ZNF362Q5T0B9 420 aaPredicted RBP14.57□□□□□ -0.08
VARS2-201ENST00000321897 ZNF438Q7Z4V0 828 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 COQ8BQ96D53 544 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 COL11A1P12107 1806 aaPredicted RBP14.57□□□□□ -0.08
VARS2-201ENST00000321897 ABHD14A-ACY1A0A1B0GW23 586 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 CACNB4O00305 520 aaPredicted RBP14.57□□□□□ -0.08
VARS2-201ENST00000321897 TAPBPO15533 448 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 KHDRBS3O75525 346 aaKnown RBP14.57□□□□□ -0.08
VARS2-201ENST00000321897 ERP29P30040 261 aaKnown RBP14.57□□□□□ -0.08
VARS2-201ENST00000321897 EVI2BP34910 448 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 VLDLRP98155 873 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 CAMK1Q14012 370 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 DPY19L1Q2PZI1 675 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 LEXMQ3ZCV2 418 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 TMEM31Q5JXX7 168 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 ENPP7Q6UWV6 458 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 LHFPL3Q86UP9 236 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 EFCAB11Q9BUY7 163 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 HDHD5Q9BXW7 423 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 PFDN2Q9UHV9 154 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 POFUT2Q9Y2G5 429 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 CDC123O75794 336 aaPredicted RBP14.57□□□□□ -0.08
VARS2-201ENST00000321897 HSF2Q03933 536 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 TGM3Q08188 693 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 SLAMF1Q13291 335 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 PPIGQ13427 754 aaKnown RBP eCLIP14.57□□□□□ -0.082e-8■■■□□ 16.9
VARS2-201ENST00000321897 FLYWCH1Q4VC44 716 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 FAM46CQ5VWP2 391 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 ZDHHC20Q5W0Z9 365 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 CD300LGQ6UXG3 332 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 LAX1Q8IWV1 398 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 OR9A1PQ8NGU1 263 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 WDR26Q9H7D7 661 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 SOHLH2Q9NX45 425 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 GPR52Q9Y2T5 361 aa14.57□□□□□ -0.08
VARS2-201ENST00000321897 LOC102723532A0A0G2JNH3 316 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 FAM155AB1AL88 458 aaPredicted RBP14.56□□□□□ -0.08
VARS2-201ENST00000321897 PTHP01270 115 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 JUPP14923 745 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 MASP1P48740 699 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 ZNF761Q86XN6 746 aaPredicted RBP14.56□□□□□ -0.08
VARS2-201ENST00000321897 DEFB119Q8N690 84 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 ATP6V1C2Q8NEY4 427 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 BCL7BQ9BQE9 202 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 GINS4Q9BRT9 223 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 ZNF225Q9UK10 706 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 LOC105369274A0A096LPK9 316 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 GABRR3A8MPY1 467 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 RPL3P39023 403 aaKnown RBP14.56□□□□□ -0.08
VARS2-201ENST00000321897 RAB33AQ14088 237 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 ZNF805Q5CZA5 627 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 FAM92BQ6ZTR7 304 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 OR4N4Q8N0Y3 316 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 C9orf43Q8TAL5 461 aaPredicted RBP14.56□□□□□ -0.08
VARS2-201ENST00000321897 CRELD1Q96HD1 420 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 HCN2Q9UL51 889 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 NDRG2Q9UN36 371 aaKnown RBP14.56□□□□□ -0.08
VARS2-201ENST00000321897 SPTBP11277 2137 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 IGLV3-10A0A075B6K4 115 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 CLCA1A8K7I4 914 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 CPNE6O95741 557 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 STARP49675 285 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 BCL2L15Q5TBC7 163 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 ANKRD54Q6NXT1 300 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 FIBINQ8TAL6 211 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 UFD1Q92890 307 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 RIT1Q92963 219 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 TADA1Q96BN2 335 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 ARSGQ96EG1 525 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 TXNDC15Q96J42 360 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 RNF121Q9H920 327 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 ANKHQ9HCJ1 492 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 FAM120CQ9NX05 1096 aaKnown RBP14.56□□□□□ -0.08
VARS2-201ENST00000321897 BRWD3Q6RI45 1802 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 SSX4O60224 188 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 STX11O75558 287 aa14.56□□□□□ -0.08
VARS2-201ENST00000321897 JRKO75564 520 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms