RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 VSX2P58304 361 aaPredicted RBP16.82■□□□□ 0.28
RAB39A-201ENST00000320578 SKP1P63208 163 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 KCNJ10P78508 379 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 PRR5P85299 388 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 DAG1Q14118 895 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 C6orf52Q5T4I8 152 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 UGT2A3Q6UWM9 527 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 HIPK1Q86Z02 1210 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 ZC3H7AQ8IWR0 971 aaKnown RBP16.82■□□□□ 0.28
RAB39A-201ENST00000320578 CCDC116Q8IYX3 515 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 OR4K14Q8NGD5 310 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 GAB3Q8WWW8 586 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 EDAQ92838 391 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 NRBF2Q96F24 287 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 SLC35G5Q96KT7 338 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 C7orf34Q96L11 122 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 ELF4Q99607 663 aaPredicted RBP16.82■□□□□ 0.28
RAB39A-201ENST00000320578 ANKRD60Q9BZ19 345 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 IL21RQ9HBE5 538 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 C3orf14Q9HBI5 128 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 ZCCHC3Q9NUD5 404 aaKnown RBP16.82■□□□□ 0.28
RAB39A-201ENST00000320578 SMPD3Q9NY59 655 aaPredicted RBP16.82■□□□□ 0.28
RAB39A-201ENST00000320578 IFT80Q9P2H3 777 aaPredicted RBP16.82■□□□□ 0.28
RAB39A-201ENST00000320578 BAG5Q9UL15 447 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 ABCA7Q8IZY2 2146 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 WASHC1A8K0Z3 465 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 HMGN4O00479 90 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 PDE9AO76083 593 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 SLITRK5O94991 958 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 EIF2S1P05198 315 aaKnown RBP16.82■□□□□ 0.28
RAB39A-201ENST00000320578 GABRA4P48169 554 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 ARRB1P49407 418 aaPredicted RBP16.82■□□□□ 0.28
RAB39A-201ENST00000320578 CHN2P52757 468 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 IQCCQ4KMZ1 466 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 GARNL3Q5VVW2 1013 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 OR2T5Q6IEZ7 315 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 CARM1Q86X55 608 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 OR2T29Q8NH02 315 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 TANKQ92844 425 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 MAP3K3Q99759 626 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 PLCL2Q9UPR0 1127 aa16.82■□□□□ 0.28
RAB39A-201ENST00000320578 TMEM247A6NEH6 219 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 M0QX08 132 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 PLOD2O00469 737 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 LAMTOR5O43504 91 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 GLB1P16278 677 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 KHKP50053 298 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 EMP3P54852 163 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 SNRPNP63162 240 aaKnown RBP16.81■□□□□ 0.28
RAB39A-201ENST00000320578 MERTKQ12866 999 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 EPS8Q12929 822 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 TP53BP2Q13625 1128 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 GNA13Q14344 377 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 NDUFA9Q16795 377 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 PRAMEF8Q5VWM4 474 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 PRAMEF7Q5VXH5 474 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 SHQ1Q6PI26 577 aaKnown RBP16.81■□□□□ 0.28
RAB39A-201ENST00000320578 TSSK4Q6SA08 328 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 DGLUCYQ7Z3D6 616 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 VTCN1Q7Z7D3 282 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 ARMC8Q8IUR7 673 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 LRRC25Q8N386 305 aaPredicted RBP16.81■□□□□ 0.28
RAB39A-201ENST00000320578 SLC25A45Q8N413 288 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 SLC38A5Q8WUX1 472 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 TAMM41Q96BW9 452 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 ELP4Q96EB1 424 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 RBM4BQ9BQ04 359 aaKnown RBP16.81■□□□□ 0.28
RAB39A-201ENST00000320578 RBM4Q9BWF3 364 aaKnown RBP16.81■□□□□ 0.28
RAB39A-201ENST00000320578 TMEM121BQ9BXQ6 578 aaPredicted RBP16.81■□□□□ 0.28
RAB39A-201ENST00000320578 LRIT1Q9P2V4 623 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 SCOCQ9UIL1 159 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 MRPS2Q9Y399 296 aaKnown RBP16.81■□□□□ 0.28
RAB39A-201ENST00000320578 RNF215Q9Y6U7 377 aa16.81■□□□□ 0.28
RAB39A-201ENST00000320578 TDRD6O60522 2096 aaKnown RBP16.81■□□□□ 0.28
RAB39A-201ENST00000320578 BLACEA4D250 179 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 C5orf58C9J3I9 102 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 H0YAE9 185 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 CYR61O00622 381 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 ASNA1O43681 348 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 SDC3O75056 442 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 ALPLP05186 524 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 GIMD1P0DJR0 217 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 MATN1P21941 496 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 FEN1P39748 380 aaKnown RBP16.8■□□□□ 0.28
RAB39A-201ENST00000320578 DCTP40126 519 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 ITGA1P56199 1179 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 FAM53BQ14153 422 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 INAVAQ3KP66 663 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 SLC36A3Q495N2 470 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 IFI44LQ53G44 452 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 TCTE1Q5JU00 501 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 CA13Q8N1Q1 262 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 ADI1Q9BV57 179 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 GABARAPL1Q9H0R8 117 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 ANKHQ9HCJ1 492 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 THSD1Q9NS62 852 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 SEMA5BQ9P283 1151 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 P2RX2Q9UBL9 471 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 PILRBQ9UKJ0 227 aa16.8■□□□□ 0.28
RAB39A-201ENST00000320578 NAALAD2Q9Y3Q0 740 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms