RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 CRISP1P54107 249 aa15.74■□□□□ 0.11
CLIP4-201ENST00000320081 MVKQ03426 396 aa15.74■□□□□ 0.11
CLIP4-201ENST00000320081 NDUFAF5Q5TEU4 345 aa15.74■□□□□ 0.11
CLIP4-201ENST00000320081 ADNP2Q6IQ32 1131 aa15.74■□□□□ 0.11
CLIP4-201ENST00000320081 USP53Q70EK8 1073 aa15.74■□□□□ 0.11
CLIP4-201ENST00000320081 CCDC80Q76M96 950 aa15.74■□□□□ 0.11
CLIP4-201ENST00000320081 ZNF420Q8TAQ5 688 aaPredicted RBP15.74■□□□□ 0.11
CLIP4-201ENST00000320081 TMCO6Q96DC7 493 aa15.74■□□□□ 0.11
CLIP4-201ENST00000320081 CD180Q99467 661 aa15.74■□□□□ 0.11
CLIP4-201ENST00000320081 RACGAP1Q9H0H5 632 aa15.74■□□□□ 0.11
CLIP4-201ENST00000320081 MRPL15Q9P015 296 aaKnown RBP15.74■□□□□ 0.11
CLIP4-201ENST00000320081 SPTBP11277 2137 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 SH3PXD2BA1X283 911 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 OR6C74A6NCV1 312 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 EIF1AYO14602 144 aaKnown RBP15.73■□□□□ 0.11
CLIP4-201ENST00000320081 SEMA3DO95025 777 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 SBK3P0C264 359 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 GABRA3P34903 492 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 STAT5AP42229 794 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 CLCN7P51798 805 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 TMBIM6P55061 237 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 SP140Q13342 867 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 PARS2Q7L3T8 475 aaKnown RBP15.73■□□□□ 0.11
CLIP4-201ENST00000320081 ZSWIM9Q86XI8 627 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 KLHL36Q8N4N3 616 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 NUP43Q8NFH3 380 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 OR10H5Q8NGA6 315 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 OR52E4Q8NGH9 312 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 OVCA2Q8WZ82 227 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 OTUB2Q96DC9 234 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 MAPKAP1Q9BPZ7 522 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 IL1RAPQ9NPH3 570 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 DCAF13Q9NV06 445 aaKnown RBP15.73■□□□□ 0.11
CLIP4-201ENST00000320081 FAM183AA6NL82 134 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 ELOA3DA6NLF2 546 aaPredicted RBP15.73■□□□□ 0.11
CLIP4-201ENST00000320081 PENKP01210 267 aaPredicted RBP15.73■□□□□ 0.11
CLIP4-201ENST00000320081 ADRB3P13945 408 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 ACVR2AP27037 513 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 ELOA3BQ3SY89 546 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 ELOA3Q8NG57 546 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 ZNF689Q96CS4 500 aaPredicted RBP15.73■□□□□ 0.11
CLIP4-201ENST00000320081 PRR14Q9BWN1 585 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 STARD5Q9NSY2 213 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 CUEDC1Q9NWM3 386 aaPredicted RBP15.73■□□□□ 0.11
CLIP4-201ENST00000320081 C11orf98E9PRG8 122 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 ZNF195O14628 629 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 PIM1P11309 404 aaPredicted RBP15.73■□□□□ 0.11
CLIP4-201ENST00000320081 PIGAP37287 484 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 EMX1Q04741 257 aaPredicted RBP15.73■□□□□ 0.11
CLIP4-201ENST00000320081 ZNF776Q68DI1 518 aaPredicted RBP15.73■□□□□ 0.11
CLIP4-201ENST00000320081 HMBOX1Q6NT76 420 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 KLHDC8AQ8IYD2 350 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 NRSN1Q8IZ57 195 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 SLC39A11Q8N1S5 342 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 RASGEF1AQ8N9B8 481 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 Q8N9G6 341 aaPredicted RBP15.73■□□□□ 0.11
CLIP4-201ENST00000320081 PMM1Q92871 262 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 FAM46AQ96IP4 442 aaKnown RBP15.73■□□□□ 0.11
CLIP4-201ENST00000320081 ZDHHC7Q9NXF8 308 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 HSPB11Q9Y547 144 aa15.73■□□□□ 0.11
CLIP4-201ENST00000320081 WASH4PA8MWX3 477 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 PCDH17O14917 1159 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 MMP2P08253 660 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 ACPPP15309 386 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 PHC1P78364 1004 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 KLBQ86Z14 1044 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 RBM12BQ8IXT5 1001 aaKnown RBP15.72■□□□□ 0.11
CLIP4-201ENST00000320081 SCAIQ8N9R8 606 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 TMEM80Q96HE8 168 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 RAD9AQ99638 391 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 SLC6A16Q9GZN6 736 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 TCF7L1Q9HCS4 588 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 MARK1Q9P0L2 795 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 AKAP8O43823 692 aaKnown RBP15.72■□□□□ 0.11
CLIP4-201ENST00000320081 PRKRAO75569 313 aaKnown RBP15.72■□□□□ 0.11
CLIP4-201ENST00000320081 KLF8O95600 359 aaPredicted RBP15.72■□□□□ 0.11
CLIP4-201ENST00000320081 TCEAL8Q8IYN2 117 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 SAMD12Q8N8I0 201 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 GNG8Q9UK08 70 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 CSNK1G3Q9Y6M4 447 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 NCOR1O75376 2440 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 ANXA2P2A6NMY6 339 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 TMX2-CTNND1H3BSU7 103 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 ANXA2P07355 339 aaKnown RBP15.72■□□□□ 0.11
CLIP4-201ENST00000320081 MAN2A2P49641 1150 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 MBTPS1Q14703 1052 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 SPCS2Q15005 226 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 CCNJQ5T5M9 372 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 NEIL3Q8TAT5 605 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 THEM6Q8WUY1 208 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 KCNN2Q9H2S1 579 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 CARD8Q9Y2G2 431 aa15.72■□□□□ 0.11
CLIP4-201ENST00000320081 CEBPBP17676 345 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 MASP1P48740 699 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 ENPP2Q13822 863 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 XKR4Q5GH76 650 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 SLC27A4Q6P1M0 643 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 CHDHQ8NE62 594 aaPredicted RBP15.71■□□□□ 0.11
CLIP4-201ENST00000320081 PIK3R3Q92569 461 aa15.71■□□□□ 0.11
CLIP4-201ENST00000320081 ZSWIM3Q96MP5 696 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms