RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 HACD2Q6Y1H2 254 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 CCDC121Q6ZUS5 278 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 TIPARPQ7Z3E1 657 aaKnown RBP12.78□□□□□ -0.36
PRPF18-201ENST00000320054 YTHDF3Q7Z739 585 aaKnown RBP12.78□□□□□ -0.36
PRPF18-201ENST00000320054 MARCH9Q86YJ5 346 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 ESX1Q8N693 406 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 PLPP5Q8NEB5 264 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 GOT1L1Q8NHS2 421 aaPredicted RBP12.78□□□□□ -0.36
PRPF18-201ENST00000320054 GTF2H4Q92759 462 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 CIDECQ96AQ7 238 aaPredicted RBP12.78□□□□□ -0.36
PRPF18-201ENST00000320054 MIEF2Q96C03 454 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 ROPN1LQ96C74 230 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 AMDHD1Q96NU7 426 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 BBS4Q96RK4 519 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 RBCK1Q9BYM8 510 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 CHST8Q9H2A9 424 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 MAP10Q9P2G4 905 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 CTSFQ9UBX1 484 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 ACSL6Q9UKU0 697 aa12.78□□□□□ -0.36
PRPF18-201ENST00000320054 A0A096LPI6 279 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 IGKV3D-11A0A0A0MRZ8 115 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 LDB3O75112 727 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 ERN1O75460 977 aaKnown RBP12.77□□□□□ -0.37
PRPF18-201ENST00000320054 JRKO75564 520 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 SLITRK5O94991 958 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 UNC5CO95185 931 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 RECKO95980 971 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 IFI6P09912 130 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 RAB40ALP0C0E4 278 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 ZCCHC18P0CG32 403 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 SLC35E2P0CK97 266 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 PORP16435 677 aaPredicted RBP12.77□□□□□ -0.37
PRPF18-201ENST00000320054 SLC5A2P31639 672 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 BTG2P78543 158 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 RHAGQ02094 409 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 SERTAD2Q14140 314 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 NCF4Q15080 339 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 LACTB2Q53H82 288 aaPredicted RBP12.77□□□□□ -0.37
PRPF18-201ENST00000320054 PAGE3Q5JUK9 113 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 LRIF1Q5T3J3 769 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 MLIPQ5VWP3 458 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 FAM198BQ6UWH4 519 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 CLECL1Q8IZS7 167 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 LRRC25Q8N386 305 aaPredicted RBP12.77□□□□□ -0.37
PRPF18-201ENST00000320054 PSMA8Q8TAA3 256 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 SUN3Q8TAQ9 357 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 RNF31Q96EP0 1072 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 NPAS2Q99743 824 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 PELOQ9BRX2 385 aaKnown RBP12.77□□□□□ -0.37
PRPF18-201ENST00000320054 AKIRIN1Q9H9L7 192 aaPredicted RBP12.77□□□□□ -0.37
PRPF18-201ENST00000320054 SLAMF7Q9NQ25 335 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 ASCL3Q9NQ33 180 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 GID8Q9NWU2 228 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 PCDHGB4Q9UN71 923 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 CLDN16Q9Y5I7 305 aa12.77□□□□□ -0.37
PRPF18-201ENST00000320054 AHCTF1Q8WYP5 2266 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 TEX51A0A1B0GUA7 166 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 B2RBV5 119 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 STMND1H3BQB6 276 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 TGFBR3LH3BV60 316 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 RFXANKO14593 260 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 AIM2O14862 343 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 CNOT3O75175 753 aaKnown RBP12.76□□□□□ -0.37
PRPF18-201ENST00000320054 CDC123O75794 336 aaPredicted RBP12.76□□□□□ -0.37
PRPF18-201ENST00000320054 KCNH1O95259 989 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 C6orf47O95873 294 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 ATP1B1P05026 303 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 KRT16P08779 473 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 GALNSP34059 522 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 FEN1P39748 380 aaKnown RBP12.76□□□□□ -0.37
PRPF18-201ENST00000320054 CPA2P48052 419 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 RASSF2P50749 326 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 NCBP2P52298 156 aaKnown RBP eCLIP12.76□□□□□ -0.37
PRPF18-201ENST00000320054 MANFP55145 182 aaKnown RBP12.76□□□□□ -0.37
PRPF18-201ENST00000320054 DUSP2Q05923 314 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 STX4Q12846 297 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 ART3Q13508 389 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 NFYCQ13952 458 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 TRMT5Q32P41 509 aaKnown RBP12.76□□□□□ -0.37
PRPF18-201ENST00000320054 MINDY4Q4G0A6 757 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 FAM199XQ6PEV8 388 aaPredicted RBP12.76□□□□□ -0.37
PRPF18-201ENST00000320054 DLEU7Q6UYE1 221 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 LAPTM4BQ86VI4 370 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 ANKRD46Q86W74 232 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 OR4N5Q8IXE1 308 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 ST13P4Q8IZP2 240 aaPredicted RBP12.76□□□□□ -0.37
PRPF18-201ENST00000320054 NLGN4XQ8N0W4 816 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 NLGN4YQ8NFZ3 816 aaPredicted RBP12.76□□□□□ -0.37
PRPF18-201ENST00000320054 PTCHD1Q96NR3 888 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 PHF12Q96QT6 1004 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 PANX1Q96RD7 426 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 SPSB2Q99619 263 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 ALOXE3Q9BYJ1 711 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 VN1R1Q9GZP7 353 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 PAIP1Q9H074 479 aaKnown RBP12.76□□□□□ -0.37
PRPF18-201ENST00000320054 C1orf21Q9H246 121 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 GLIPR2Q9H4G4 154 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 NEUROD4Q9HD90 331 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 NECTIN3Q9NQS3 549 aa12.76□□□□□ -0.37
PRPF18-201ENST00000320054 NDE1Q9NXR1 346 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms