RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TMCO6Q96DC7 493 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 COQ10AQ96MF6 247 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 RIPOR3Q96MK2 946 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 ABCG4Q9H172 646 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 LTBP2Q14767 1821 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 FAM25AB3EWG3 89 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 FAM25CB3EWG5 89 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 FAM25GB3EWG6 89 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 FGF19O95750 216 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 HOXB9P17482 250 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 CHI3L1P36222 383 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 HYAL2Q12891 473 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 MTAPQ13126 283 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 CDONQ4KMG0 1287 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 FAHD1Q6P587 224 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 HMGN2P46Q86SG4 172 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 LSRQ86X29 649 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 LAX1Q8IWV1 398 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 GPR65Q8IYL9 337 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 CXorf40AQ8TE69 158 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 TBC1D20Q96BZ9 403 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 FAM129BQ96TA1 746 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 TRAPPC4Q9Y296 219 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 SPEF1Q9Y4P9 236 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 ZNF106Q9H2Y7 1883 aaKnown RBP14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 A0A1W2PQ72 361 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 GPX5O75715 221 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 SOX6P35712 828 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 RPS19P39019 145 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 RGNQ15493 299 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 TSTQ16762 297 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 SERPINA11Q86U17 422 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 CCDC28AQ8IWP9 274 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 SDR16C5Q8N3Y7 309 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 ZNF557Q8N988 423 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 UBASH3BQ8TF42 649 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 OTUB1Q96FW1 271 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 SLC35A5Q9BS91 424 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 MKRN2Q9H000 416 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 NARFLQ9H6Q4 476 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 REEP1Q9H902 201 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 FKBP14Q9NWM8 211 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 FAM120CQ9NX05 1096 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 RHCGQ9UBD6 479 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 QSOX1O00391 747 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 IDH2P48735 452 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 SEC13P55735 322 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 ELAVL3Q14576 367 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 KIAA0907Q7Z7F0 614 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 ATCAYQ86WG3 371 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 RNF130Q86XS8 419 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 FAM109AQ8N4B1 249 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 OR8J2Q8NGG1 315 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 NFKBIDQ8NI38 313 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 MYDGFQ969H8 173 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 PPCDCQ96CD2 204 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 VPS35Q96QK1 796 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 XKR8Q9H6D3 395 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 SMURF1Q9HCE7 757 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 MIEF1Q9NQG6 463 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 CUEDC1Q9NWM3 386 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 MAT2BQ9NZL9 334 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 MARK1Q9P0L2 795 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 LAMA1P25391 3075 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 CARNS1A5YM72 827 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 WASHC1A8K0Z3 465 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 H7BY64 318 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 SUV39H1O43463 412 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 SCO1O75880 301 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 PAK4O96013 591 aaPredicted RBP14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 SEMG1P04279 462 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 SRPRAP08240 638 aaKnown RBP14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 IL3P08700 152 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 GPX2P18283 190 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 P2RY2P41231 377 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 LRRC74AQ0VAA2 488 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 PRSS53Q2L4Q9 553 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 TANGO2Q6ICL3 276 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 WASH2PQ6VEQ5 465 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 PRR23CQ6ZRP0 262 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 STX19Q8N4C7 294 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 CHTF18Q8WVB6 975 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 SLC5A11Q8WWX8 675 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 OTUB2Q96DC9 234 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 CHFRQ96EP1 664 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 PRAP1Q96NZ9 151 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 CNPPD1Q9BV87 410 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 ZNF226Q9NYT6 803 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 STMN3Q9NZ72 180 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 MYO10Q9HD67 2058 aa14.79□□□□□ -0.04
SHROOM1-201ENST00000319854 C1GALT1C1LP0DN25 315 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 PRPH2P23942 346 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 MAT2AP31153 395 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 SOX9P48436 509 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 CRYBA2P53672 197 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 PNLIPRP1P54315 467 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 KCNC3Q14003 757 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 GANABQ14697 944 aaKnown RBP14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 IQCCQ4KMZ1 466 aa14.78□□□□□ -0.04
SHROOM1-201ENST00000319854 HIST2H2AA3Q6FI13 130 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms