RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 MS4A8Q9BY19 250 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 ANKZF1Q9H8Y5 726 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 SEMA4BQ9NPR2 832 aaPredicted RBP13.13□□□□□ -0.31
RPP40-201ENST00000319533 WWOXQ9NZC7 414 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 DMGDHQ9UI17 866 aaKnown RBP13.13□□□□□ -0.31
RPP40-201ENST00000319533 PTBP2Q9UKA9 531 aaKnown RBP13.13□□□□□ -0.31
RPP40-201ENST00000319533 MAP1AP78559 2803 aaPredicted RBP13.12□□□□□ -0.31
RPP40-201ENST00000319533 ATP6AP2A0A1C7CYW4 349 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 FAM47E-STBD1D6RA91 191 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 ATP6AP2O75787 350 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 ZWINTO95229 277 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 NADKO95544 446 aaPredicted RBP13.12□□□□□ -0.31
RPP40-201ENST00000319533 RHOXF2BP0C7M4 288 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 CCDC166P0CW27 439 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 GABRA1P14867 456 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 ENDOUP21128 410 aaKnown RBP13.12□□□□□ -0.31
RPP40-201ENST00000319533 HIST1H1TP22492 207 aaPredicted RBP13.12□□□□□ -0.31
RPP40-201ENST00000319533 CRABP2P29373 138 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 STT3AP46977 705 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 HSPA7P48741 367 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 FOLH1Q04609 750 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 PCDH1Q08174 1060 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 TBL3Q12788 808 aaKnown RBP13.12□□□□□ -0.31
RPP40-201ENST00000319533 BIKQ13323 160 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 ZKSCAN8Q15776 578 aaPredicted RBP13.12□□□□□ -0.31
RPP40-201ENST00000319533 PDK4Q16654 411 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 TMEM35AQ53FP2 167 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 PAGE2BQ5JRK9 111 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 WLSQ5T9L3 541 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 ARSKQ6UWY0 536 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 LYPD8Q6UX82 237 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 RELL1Q8IUW5 271 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 SLC15A4Q8N697 577 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 PAQR8Q8TEZ7 354 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 ZNF473Q8WTR7 871 aaKnown RBP13.12□□□□□ -0.31
RPP40-201ENST00000319533 NRGNQ92686 78 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 SENP5Q96HI0 755 aaPredicted RBP13.12□□□□□ -0.31
RPP40-201ENST00000319533 RHOXF2Q9BQY4 288 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 NINJ2Q9NZG7 142 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 SPRR3Q9UBC9 169 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 COPS7AQ9UBW8 275 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 ACAD8Q9UKU7 415 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 PRRC2AP48634 2157 aaKnown RBP13.12□□□□□ -0.31
RPP40-201ENST00000319533 AKAP6Q13023 2319 aa13.12□□□□□ -0.31
RPP40-201ENST00000319533 NIPBLQ6KC79 2804 aaeCLIP13.12□□□□□ -0.31
RPP40-201ENST00000319533 UQCRHLA0A096LP55 91 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 TRGV5A0A0B4J1U4 118 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 FAM155BO75949 473 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 CD99P14209 185 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 CD1DP15813 335 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 OR4D1Q15615 310 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 UAP1Q16222 522 aaPredicted RBP13.11□□□□□ -0.31
RPP40-201ENST00000319533 HIST2H2ACQ16777 129 aaPredicted RBP13.11□□□□□ -0.31
RPP40-201ENST00000319533 HIST2H2AA3Q6FI13 130 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 TBC1D1Q86TI0 1168 aaPredicted RBP13.11□□□□□ -0.31
RPP40-201ENST00000319533 C9orf40Q8IXQ3 194 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 LAS2Q8IYD9 372 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 DND1Q8IYX4 353 aaKnown RBP13.11□□□□□ -0.31
RPP40-201ENST00000319533 LRRC25Q8N386 305 aaPredicted RBP13.11□□□□□ -0.31
RPP40-201ENST00000319533 SPATA6LQ8N4H0 392 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 SREK1Q8WXA9 508 aaKnown RBP13.11□□□□□ -0.31
RPP40-201ENST00000319533 ESAMQ96AP7 390 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 MRRFQ96E11 262 aaKnown RBP13.11□□□□□ -0.31
RPP40-201ENST00000319533 UBXN10Q96LJ8 280 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 ZNF703Q9H7S9 590 aaPredicted RBP13.11□□□□□ -0.31
RPP40-201ENST00000319533 PROK2Q9HC23 129 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 ACKR4Q9NPB9 350 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 ZNF358Q9NW07 568 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 QPCTLQ9NXS2 382 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 DNAJB12Q9NXW2 375 aaKnown RBP13.11□□□□□ -0.31
RPP40-201ENST00000319533 B4GALT7Q9UBV7 327 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.11□□□□□ -0.31
RPP40-201ENST00000319533 SPACA6W5XKT8 324 aa13.11□□□□□ -0.31
RPP40-201ENST00000319533 ACANP16112 2415 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 SYT5O00445 386 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 FGF17O60258 216 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 S100BP04271 92 aaPredicted RBP13.1□□□□□ -0.31
RPP40-201ENST00000319533 RFPL3SP0C7P2 107 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 COX7A2P14406 83 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 SERPINB1P30740 379 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 PIGAP37287 484 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 PEX19P40855 299 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 MSH2P43246 934 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 ID2Q02363 134 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 IRF8Q02556 426 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 ASPHQ12797 758 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 CHIT1Q13231 466 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 FBXO48Q5FWF7 155 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 SLC22A10Q63ZE4 541 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 SEM1Q6ZVN7 128 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 LRRC70Q7Z2Q7 622 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 CCDC91Q7Z6B0 441 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 CMC1Q7Z7K0 106 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 TGIF2LYQ8IUE0 185 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 FBXW8Q8N3Y1 598 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 SNX31Q8N9S9 440 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 SLC22A8Q8TCC7 542 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 UBE2E3Q969T4 207 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 FBXL20Q96IG2 436 aa13.1□□□□□ -0.31
RPP40-201ENST00000319533 CNPPD1Q9BV87 410 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms