RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ESPNLQ6ZVH7 1005 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 FAM109AQ8N4B1 249 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 OR7G3Q8NG95 312 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 ZNF431Q8TF32 576 aaPredicted RBP13.53□□□□□ -0.24
PABPC1-201ENST00000318607 NEIL2Q969S2 332 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 C12orf66Q96MD2 445 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 FCRL4Q96PJ5 515 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 FERD3LQ96RJ6 166 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 PIP5K1AQ99755 562 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 HSPE1-MOB4S4R3N1 261 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 PLA2G10O15496 165 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 TSPAN6O43657 245 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 CR2P20023 1033 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 VSX2P58304 361 aaPredicted RBP13.53□□□□□ -0.24
PABPC1-201ENST00000318607 PCBP1Q15365 356 aaKnown RBP eCLIP13.53□□□□□ -0.243e-28■■■□□ 17.7
PABPC1-201ENST00000318607 SPRYD7Q5W111 196 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 ATCAYQ86WG3 371 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 CFAP206Q8IYR0 622 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 PMM1Q92871 262 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 DCLRE1CQ96SD1 692 aaKnown RBP13.53□□□□□ -0.24
PABPC1-201ENST00000318607 ARHGAP39Q9C0H5 1083 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 MVB12BQ9H7P6 319 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 RUVBL1Q9Y265 456 aaKnown RBP13.53□□□□□ -0.24
PABPC1-201ENST00000318607 MYOFQ9NZM1 2061 aa13.53□□□□□ -0.24
PABPC1-201ENST00000318607 ZC3H12DA2A288 527 aaKnown RBP13.52□□□□□ -0.24
PABPC1-201ENST00000318607 SIGLEC5O15389 551 aa13.52□□□□□ -0.24
PABPC1-201ENST00000318607 IL3P08700 152 aa13.52□□□□□ -0.24
PABPC1-201ENST00000318607 DDOSTP39656 456 aa13.52□□□□□ -0.24
PABPC1-201ENST00000318607 MAGEA11P43364 429 aa13.52□□□□□ -0.24
PABPC1-201ENST00000318607 SIGLEC14Q08ET2 396 aa13.52□□□□□ -0.24
PABPC1-201ENST00000318607 TRIM40Q6P9F5 258 aa13.52□□□□□ -0.24
PABPC1-201ENST00000318607 DEFB128Q7Z7B8 93 aa13.52□□□□□ -0.24
PABPC1-201ENST00000318607 CEP76Q8TAP6 659 aa13.52□□□□□ -0.24
PABPC1-201ENST00000318607 GCDHQ92947 438 aaPredicted RBP13.52□□□□□ -0.24
PABPC1-201ENST00000318607 ZBED6CLQ96FA7 236 aaPredicted RBP13.52□□□□□ -0.24
PABPC1-201ENST00000318607 F5P12259 2224 aa13.52□□□□□ -0.24
PABPC1-201ENST00000318607 SCAMP2O15127 329 aaKnown RBP13.52□□□□□ -0.25
PABPC1-201ENST00000318607 PRKRAO75569 313 aaKnown RBP13.52□□□□□ -0.25
PABPC1-201ENST00000318607 CD160O95971 181 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 MRPL3P09001 348 aaKnown RBP13.52□□□□□ -0.25
PABPC1-201ENST00000318607 NR2F1P10589 423 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 COX10Q12887 443 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 FCRLBQ6BAA4 426 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 CRTC1Q6UUV9 634 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 RTN4RL1Q86UN2 441 aaPredicted RBP13.52□□□□□ -0.25
PABPC1-201ENST00000318607 COL26A1Q96A83 441 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 TRMT61BQ9BVS5 477 aaKnown RBP13.52□□□□□ -0.25
PABPC1-201ENST00000318607 ABCG5Q9H222 651 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 GPATCH2Q9NW75 528 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 EXTL2Q9UBQ6 330 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 A0A0B4J203 849 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 PRR23AA6NEV1 266 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 RGS13O14921 159 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 LYRM1O43325 122 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 CD3GP09693 182 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 VIPR1P32241 457 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 LIM2P55344 173 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 SUZ12Q15022 739 aaKnown RBP13.52□□□□□ -0.25
PABPC1-201ENST00000318607 RETSATQ6NUM9 610 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 SLC30A6Q6NXT4 461 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 COMMD6Q7Z4G1 85 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 CHST14Q8NCH0 376 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 GANCQ8TET4 914 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 GTF3C2Q8WUA4 911 aaPredicted RBP13.52□□□□□ -0.25
PABPC1-201ENST00000318607 CRELD1Q96HD1 420 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 CCDC32Q9BV29 185 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 MIXL1Q9H2W2 232 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 CCDC59Q9P031 241 aaKnown RBP13.52□□□□□ -0.25
PABPC1-201ENST00000318607 MAN2B2Q9Y2E5 1009 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 SZT2Q5T011 3432 aa13.52□□□□□ -0.25
PABPC1-201ENST00000318607 ZNF236Q9UL36 1845 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 SLC30A4O14863 429 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 DDCP20711 480 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 SERPINA4P29622 427 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 CD70P32970 193 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 ACSM5Q6NUN0 579 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 KLBQ86Z14 1044 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 BOLLQ8N9W6 283 aaKnown RBP13.51□□□□□ -0.25
PABPC1-201ENST00000318607 DENND6BQ8NEG7 585 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 OR4M2Q8NGB6 313 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 NEIL3Q8TAT5 605 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 UPRTQ96BW1 309 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 FNDC11Q9BVV2 318 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 NLNQ9BYT8 704 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 LHX3Q9UBR4 397 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 B4GALT6Q9UBX8 382 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 STUB1Q9UNE7 303 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 ARHGEF33A8MVX0 844 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 CTSCP53634 463 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 B4GALNT1Q00973 533 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 OC90Q02509 493 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-201ENST00000318607 MZT2BQ6NZ67 158 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.51□□□□□ -0.25
PABPC1-201ENST00000318607 LRRC17Q8N6Y2 441 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 SAMD12Q8N8I0 201 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 TM9SF4Q92544 642 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 PEX13Q92968 403 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 CLP1Q92989 425 aaKnown RBP13.51□□□□□ -0.25
PABPC1-201ENST00000318607 UCN3Q969E3 161 aa13.51□□□□□ -0.25
PABPC1-201ENST00000318607 EPYCQ99645 322 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms