RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 YIF1BQ5BJH7 314 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 LRRC56Q8IYG6 542 aaPredicted RBP18.15■□□□□ 0.5
RTN4-201ENST00000317610 CACTIN-AS1Q8N1I8 211 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 RASSF5Q8WWW0 418 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 TMEM19Q96HH6 336 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 TTYH2Q9BSA4 534 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 RRAGCQ9HB90 399 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 TRPV5Q9NQA5 729 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 PAQR5Q9NXK6 330 aaPredicted RBP18.15■□□□□ 0.5
RTN4-201ENST00000317610 TESQ9UGI8 421 aaKnown RBP18.15■□□□□ 0.5
RTN4-201ENST00000317610 BOLA1Q9Y3E2 137 aa18.15■□□□□ 0.5
RTN4-201ENST00000317610 H3BN98 237 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 TFECO14948 347 aaPredicted RBP18.14■□□□□ 0.49
RTN4-201ENST00000317610 BCHEP06276 602 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 CHRNEQ04844 493 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 TMEM115Q12893 351 aaPredicted RBP18.14■□□□□ 0.49
RTN4-201ENST00000317610 TRIM60Q495X7 471 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 NXPE4Q6UWF7 544 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 BCDIN3DQ7Z5W3 292 aaKnown RBP18.14■□□□□ 0.49
RTN4-201ENST00000317610 MMP21Q8N119 569 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 OR52I1Q8NGK6 324 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 SLC5A11Q8WWX8 675 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 RIPOR3Q96MK2 946 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 ZIC5Q96T25 663 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 NELL2Q99435 816 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 POLDIP3Q9BY77 421 aaKnown RBP18.14■□□□□ 0.49
RTN4-201ENST00000317610 MIEF1Q9NQG6 463 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 MTCL1Q9Y4B5 1905 aaKnown RBP18.14■□□□□ 0.49
RTN4-201ENST00000317610 SCN5AQ14524 2016 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 NINQ8N4C6 2090 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 A0A1W2PQL4 384 aaPredicted RBP18.14■□□□□ 0.49
RTN4-201ENST00000317610 FABP12A6NFH5 140 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 LEFTY2O00292 366 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 PDE9AO76083 593 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 ALX3O95076 343 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 RAB36O95755 333 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 TIMP2P16035 220 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 DMPKQ09013 629 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 HNRNPA0Q13151 305 aaKnown RBP18.14■□□□□ 0.49
RTN4-201ENST00000317610 FLYWCH1Q4VC44 716 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 TMEM220Q6QAJ8 160 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 FGF11Q92914 225 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 PPP1R16AQ96I34 528 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 PLSCR3Q9NRY6 295 aa18.14■□□□□ 0.49
RTN4-201ENST00000317610 A0A0B4J293 547 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 STK25O00506 426 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 POLR1CO15160 346 aaPredicted RBP18.13■□□□□ 0.49
RTN4-201ENST00000317610 CLEC2LP0C7M8 214 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 MYL9P24844 172 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 TM4SF4P48230 202 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 KCNJ5P48544 419 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 SLC9A3P48764 834 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 SMIM11AP58511 58 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 MXD1Q05195 221 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 CD300LDQ6UXZ3 194 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 USP30Q70CQ3 517 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 ZNF438Q7Z4V0 828 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 GPR65Q8IYL9 337 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 OR4D11Q8NGI4 311 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 OR5P2Q8WZ92 322 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 RNF31Q96EP0 1072 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 ZNF354BQ96LW1 612 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 RNF121Q9H920 327 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 RANGRFQ9HD47 186 aaPredicted RBP18.13■□□□□ 0.49
RTN4-201ENST00000317610 NUFIP1Q9UHK0 495 aaKnown RBP18.13■□□□□ 0.49
RTN4-201ENST00000317610 MYOFQ9NZM1 2061 aa18.13■□□□□ 0.49
RTN4-201ENST00000317610 LINC00854A0A1B0GVQ3 168 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 PRKYO43930 277 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 TBX19O60806 448 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 RB1P06400 928 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 RPS26P62854 115 aaKnown RBP18.12■□□□□ 0.49
RTN4-201ENST00000317610 CAMK2BQ13554 666 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 TNFAIP8L2Q6P589 184 aaPredicted RBP18.12■□□□□ 0.49
RTN4-201ENST00000317610 OR9A1PQ8NGU1 263 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 FRMD6Q96NE9 622 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 SLAMF7Q9NQ25 335 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 BRCA2P51587 3418 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 NUP210Q8TEM1 1887 aaPredicted RBP18.12■□□□□ 0.49
RTN4-201ENST00000317610 PLA2G10O15496 165 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 PRKCAP17252 672 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 HLA-DMAP28067 261 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 PBLDP30039 288 aaPredicted RBP18.12■□□□□ 0.49
RTN4-201ENST00000317610 GAS1P54826 345 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 EFNB1P98172 346 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 MEF2AQ02078 507 aaPredicted RBP18.12■□□□□ 0.49
RTN4-201ENST00000317610 TAP2Q03519 686 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 SYT14P1Q58G82 188 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 PDZK1Q5T2W1 519 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 DDI2Q5TDH0 399 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 C22orf42Q6IC83 251 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 DPPA4Q7L190 304 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 TMC8Q8IU68 726 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 LIX1LQ8IVB5 337 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 SLC7A13Q8TCU3 470 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 UBE2E3Q969T4 207 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 DIRAS2Q96HU8 199 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 FYTTD1Q96QD9 318 aaKnown RBP18.12■□□□□ 0.49
RTN4-201ENST00000317610 EPHX3Q9H6B9 360 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 ZSCAN32Q9NX65 697 aa18.12■□□□□ 0.49
RTN4-201ENST00000317610 TRAV19A0A0A6YYK7 116 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms