RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 PHF12Q96QT6 1004 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 FAM173AQ9BQD7 235 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 MRPL46Q9H2W6 279 aaKnown RBP16.45■□□□□ 0.22
TPM1-203ENST00000317516 SACM1LQ9NTJ5 587 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 ZNF358Q9NW07 568 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 XPR1Q9UBH6 696 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 ASB4Q9Y574 426 aa16.45■□□□□ 0.22
TPM1-203ENST00000317516 CACNA1DQ01668 2161 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 CREBBPQ92793 2442 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 TRIM49D1C9J1S8 452 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 OR7A17O14581 309 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 EEDO75530 441 aaKnown RBP16.44■□□□□ 0.22
TPM1-203ENST00000317516 CLDN14O95500 239 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 IGKV3-11P04433 115 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 COX6B1P14854 86 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 GALNSP34059 522 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 ASPHQ12797 758 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 UBAP2Q5T6F2 1119 aaKnown RBP16.44■□□□□ 0.22
TPM1-203ENST00000317516 FRG2Q64ET8 278 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 TMEM211Q6ICI0 200 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 SLC29A4Q7RTT9 530 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 PAGE2Q7Z2X7 111 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 MILR1Q7Z6M3 343 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 OR52N2Q8NGI0 321 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 KIF18AQ8NI77 898 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 RIT1Q92963 219 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 MTFMTQ96DP5 389 aaKnown RBP16.44■□□□□ 0.22
TPM1-203ENST00000317516 CDK15Q96Q40 435 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 FRG2BQ96QU4 278 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 CNPPD1Q9BV87 410 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 ZNF717Q9BY31 904 aaPredicted RBP16.44■□□□□ 0.22
TPM1-203ENST00000317516 DEFB127Q9H1M4 99 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 DEPPQ9NTK1 212 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 COQ3Q9NZJ6 369 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 PCTPQ9UKL6 214 aa16.44■□□□□ 0.22
TPM1-203ENST00000317516 A0A1W2PR48 441 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 ENO4A6NNW6 628 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 TMPRSS11DO60235 418 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 PDE9AO76083 593 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 OTCP00480 354 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 SLC35E2P0CK97 266 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 GRNP28799 593 aaKnown RBP16.43■□□□□ 0.22
TPM1-203ENST00000317516 PTGER4P35408 488 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 ZNF267Q14586 743 aaPredicted RBP16.43■□□□□ 0.22
TPM1-203ENST00000317516 SPRED3Q2MJR0 410 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 SLC22A10Q63ZE4 541 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 FAM47EQ6ZV65 393 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 FGD2Q7Z6J4 655 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 LURAP1LQ8IV03 231 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 MCEMP1Q8IX19 187 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 IFT20Q8IY31 132 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 DND1Q8IYX4 353 aaKnown RBP16.43■□□□□ 0.22
TPM1-203ENST00000317516 CNPY4Q8N129 248 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 CEP112Q8N8E3 955 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 OR52B6Q8NGF0 335 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 UHMK1Q8TAS1 419 aaKnown RBP16.43■□□□□ 0.22
TPM1-203ENST00000317516 DCAKDQ8WVC6 231 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 ELOVL6Q9H5J4 265 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 PLSCR2Q9NRY7 297 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 ADAM29Q9UKF5 820 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 ITPR2Q14571 2701 aa16.43■□□□□ 0.22
TPM1-203ENST00000317516 NBPF19A0A087WUL8 3843 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 EXOC1LA0A1B0GW35 172 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 GLOD5A6NK44 160 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 OR6C76A6NM76 312 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 ZNHIT1O43257 154 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 GUCY1B2O75343 617 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 PIK3R1P27986 724 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 ECHS1P30084 290 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 HERVK_113P63132 956 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 ERVK-8P63133 956 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 GGTA1PQ4G0N0 100 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 OR52E8Q6IFG1 317 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 C3P1Q6ZMU1 363 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 RNF111Q6ZNA4 994 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 CD163Q86VB7 1156 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 MYRIPQ8NFW9 859 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 CA5BP1Q8WTZ4 195 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 MTBPQ96DY7 904 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 DMRTA2Q96SC8 542 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 ERVK-6Q9BXR3 956 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 TTTY12Q9BZ98 90 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 TP63Q9H3D4 680 aaPredicted RBP16.42■□□□□ 0.22
TPM1-203ENST00000317516 IL1RL2Q9HB29 575 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 SEMA4BQ9NPR2 832 aaPredicted RBP16.42■□□□□ 0.22
TPM1-203ENST00000317516 NMRK1Q9NWW6 199 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 ERVK-19Q9WJR5 959 aa16.42■□□□□ 0.22
TPM1-203ENST00000317516 PINLYPA6NC86 204 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 FAM166BA8MTA8 275 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 ADAM10O14672 748 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 PRKRAO75569 313 aaKnown RBP16.41■□□□□ 0.22
TPM1-203ENST00000317516 AIFM1O95831 613 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 GBAP04062 536 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 KLK1P06870 262 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 ABHD2P08910 425 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 TAC1P20366 129 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 SERPINB3P29508 390 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 ZNF791Q3KP31 576 aaPredicted RBP16.41■□□□□ 0.22
TPM1-203ENST00000317516 TEX35Q5T0J7 233 aa16.41■□□□□ 0.22
TPM1-203ENST00000317516 CCNYL2Q5T2Q4 361 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms