RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 PARP8Q8N3A8 854 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 OR5K2Q8NHB8 316 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 FCGR1BQ92637 280 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 TAMM41Q96BW9 452 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 YIPF6Q96EC8 236 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 KCNC2Q96PR1 638 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 FEVQ99581 238 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 LRFN3Q9BTN0 628 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 SLC6A16Q9GZN6 736 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 EPS8L2Q9H6S3 715 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 AASSQ9UDR5 926 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 ENOPH1Q9UHY7 261 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 MOSPD1Q9UJG1 213 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 PLAGL1Q9UM63 463 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 KCNK6Q9Y257 313 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 PLEKHM1Q9Y4G2 1056 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 GPSM3Q9Y4H4 160 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 PCDHGA6Q9Y5G7 932 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 HRO43593 1189 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 KLHL18O94889 574 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 ZBTB11O95625 1053 aaPredicted RBP13.45□□□□□ -0.26
VRK3-201ENST00000316763 ERGP11308 486 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 ACVR2AP27037 513 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 CDH12P55289 794 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 DSTNP60981 165 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 DEPDC1Q5TB30 811 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 KHDRBS2Q5VWX1 349 aaKnown RBP13.45□□□□□ -0.26
VRK3-201ENST00000316763 LAIR1Q6GTX8 287 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 VN1R5Q7Z5H4 357 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 ENTHD1Q8IYW4 607 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 SLC22A18ASQ8N1D0 253 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 DEPDC4Q8N2C3 294 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 C2orf73Q8N5S3 287 aaPredicted RBP13.45□□□□□ -0.26
VRK3-201ENST00000316763 SLC5A8Q8N695 610 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 SMYD1Q8NB12 490 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 ABHD11Q8NFV4 315 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 CADM4Q8NFZ8 388 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 OR13H1Q8NG92 308 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 OR5AK3PQ8NH89 298 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 MYDGFQ969H8 173 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 ACAT2Q9BWD1 397 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 PITHD1Q9GZP4 211 aaPredicted RBP13.45□□□□□ -0.26
VRK3-201ENST00000316763 ACOT13Q9NPJ3 140 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 FAIMQ9NVQ4 179 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 SPATA7Q9P0W8 599 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 TAAR2Q9P1P5 351 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 ACSL6Q9UKU0 697 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 DGKBQ9Y6T7 804 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 SPAG17Q6Q759 2223 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 METTL12A8MUP2 240 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 PCDHGA12O60330 932 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 TBX19O60806 448 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 WBP4O75554 376 aaKnown RBP13.45□□□□□ -0.26
VRK3-201ENST00000316763 FADS2O95864 444 aaKnown RBP13.45□□□□□ -0.26
VRK3-201ENST00000316763 DDCP20711 480 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 NR4A1P22736 598 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 TPP2P29144 1249 aaPredicted RBP13.45□□□□□ -0.26
VRK3-201ENST00000316763 GSTM5P46439 218 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 CCR8P51685 355 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 MAPK12P53778 367 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 SRP54P61011 504 aaKnown RBP13.45□□□□□ -0.26
VRK3-201ENST00000316763 ZNF846Q147U1 533 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 SMN1Q16637 294 aaKnown RBP13.45□□□□□ -0.26
VRK3-201ENST00000316763 DGUOKQ16854 277 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 ALG11Q2TAA5 492 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 UAP1L1Q3KQV9 507 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 TSEN54Q7Z6J9 526 aaKnown RBP13.45□□□□□ -0.26
VRK3-201ENST00000316763 TMEFF1Q8IYR6 380 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 LGI4Q8N135 537 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 RAB42Q8N4Z0 105 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 SLC15A4Q8N697 577 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 OR4C15Q8NGM1 316 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 FAM174AQ8TBP5 190 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 OR5P2Q8WZ92 322 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 SMPDL3AQ92484 453 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 INSM2Q96T92 566 aaPredicted RBP13.45□□□□□ -0.26
VRK3-201ENST00000316763 PIP5K1AQ99755 562 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 MENTQ9BUN1 341 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 OSGEPL1Q9H4B0 414 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 NT5DC2Q9H857 520 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 PLCXD1Q9NUJ7 323 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 ZSCAN32Q9NX65 697 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 TAC3Q9UHF0 121 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 RNF6Q9Y252 685 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 B3GNT3Q9Y2A9 372 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 SNX8Q9Y5X2 465 aa13.45□□□□□ -0.26
VRK3-201ENST00000316763 SDK1Q7Z5N4 2213 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 CUL9Q8IWT3 2517 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 C5orf58C9J3I9 102 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 CAPN5O15484 640 aaPredicted RBP13.44□□□□□ -0.26
VRK3-201ENST00000316763 MAN1A2O60476 641 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 CBFA2T3O75081 653 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 TNFRSF1BP20333 461 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 OR1E2P47887 323 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 MASP1P48740 699 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 NUBP1P53384 320 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 TEKQ02763 1124 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 NR1D2Q14995 579 aa13.44□□□□□ -0.26
VRK3-201ENST00000316763 HEPACAMQ14CZ8 416 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms