RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 MED17Q9NVC6 651 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 MGAT4AQ9UM21 535 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 RWDD3Q9Y3V2 267 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 A0A0B4J293 547 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 A0A0X1KG70 313 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 IQCF5A8MTL0 148 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 REM1O75628 298 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 FAM157BP0CG42 384 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ACP2P11117 423 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 IFI30P13284 250 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 MVDP53602 400 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 DCDC1P59894 354 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ACSM1Q08AH1 577 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 GRB14Q14449 540 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 FCN2Q15485 313 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TRAM1Q15629 374 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 NTRK2Q16620 822 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF284Q2VY69 593 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ZMAT1Q5H9K5 638 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SLC22A10Q63ZE4 541 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SLC36A4Q6YBV0 504 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TPRA1Q86W33 373 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TMC8Q8IU68 726 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 RAVER1Q8IY67 606 aaKnown RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 OR8H3Q8N146 312 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SRFBP1Q8NEF9 429 aaKnown RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 OR9Q2Q8NGE9 314 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 OR52N1Q8NH53 320 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 RNF31Q96EP0 1072 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 RNFT2Q96EX2 444 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 C11orf24Q96F05 449 aaPredicted RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SLC35A5Q9BS91 424 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TMEM168Q9H0V1 697 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 OR51J1Q9H342 316 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 CWH43Q9H720 699 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 NEUROD4Q9HD90 331 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TVP23BQ9NYZ1 205 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 DNAJC27Q9NZQ0 273 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 KIF25Q9UIL4 384 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PCDHB7Q9Y5E2 793 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TLX2O43763 284 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 NUP62P37198 522 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 SOX3P41225 446 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 BDKRB1P46663 353 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 MTNR1BP49286 362 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 FAM189BP81408 668 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 GINS1Q14691 196 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 ARHGAP15Q53QZ3 475 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 LYPD8Q6UX82 237 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 C15orf40Q8WUR7 153 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 B3GALT6Q96L58 329 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 FN3KQ9H479 309 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF408Q9H9D4 720 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 CUEDC1Q9NWM3 386 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 A0A0D9SEW6 157 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 GSAPA4D1B5 854 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 NAP1L6A6NFF2 107 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 GABRR3A8MPY1 467 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 TBX19O60806 448 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 EFCAB14O75071 495 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 BPIP17213 487 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 SHC2P98077 582 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 PITPNAQ00169 270 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 MINDY4Q4G0A6 757 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 CCSAPQ6IQ19 270 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 GRHL2Q6ISB3 625 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 CD300LGQ6UXG3 332 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 MARCH9Q86YJ5 346 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 KLHL36Q8N4N3 616 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 NEIL3Q8TAT5 605 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 UPRTQ96BW1 309 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 CACNG6Q9BXT2 260 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 R3HDMLQ9H3Y0 253 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 WDR70Q9NW82 654 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 AFF4Q9UHB7 1163 aaKnown RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 BAIAP2Q9UQB8 552 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 SNX11Q9Y5W9 270 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 AKR7A2O43488 359 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 NME6O75414 186 aaPredicted RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 IGSF6O95976 241 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 UQCRC2P22695 453 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 CRYBA2P53672 197 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 SNRPD2P62316 118 aaKnown RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 DOC2AQ14183 400 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 KRT33BQ14525 404 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 SEC23BQ15437 767 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 FAM110CQ1W6H9 321 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 PAN2Q504Q3 1202 aaKnown RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 RRM2BQ7LG56 351 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 OAFQ86UD1 273 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 OR56B4Q8NH76 319 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 TM9SF4Q92544 642 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 MTFMTQ96DP5 389 aaKnown RBP4.55□□□□□ -1.68
PTPN13-201ENST00000316707 LRR1Q96L50 414 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 GALNT9Q9HCQ5 603 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 MYNNQ9NPC7 610 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 ENAMQ9NRM1 1142 aa4.55□□□□□ -1.68
PTPN13-201ENST00000316707 TMEM184CQ9NVA4 438 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms