RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 PROX2Q3B8N5 592 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 DNM1P34Q6PK57 102 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 CCBE1Q6UXH8 406 aaPredicted RBP13.17□□□□□ -0.3
SPAST-201ENST00000315285 C7orf57Q8NEG2 295 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 KCNK12Q9HB15 430 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 RDH14Q9HBH5 336 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 HRASLS2Q9NWW9 162 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 CLDND1Q9NY35 253 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 MAFFQ9ULX9 164 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 SOBPA7XYQ1 873 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 CLCA1A8K7I4 914 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 ZNF701M0R085 212 aaPredicted RBP13.17□□□□□ -0.3
SPAST-201ENST00000315285 FBP2O00757 339 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 SLC19A2O60779 497 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 RFPL2O75678 378 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 HK3P52790 923 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 AP2S1P53680 142 aaPredicted RBP13.17□□□□□ -0.3
SPAST-201ENST00000315285 CATSPEREQ5SY80 951 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 OR52P1PQ8NH57 321 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 MVB12BQ9H7P6 319 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 RNF186Q9NXI6 227 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 ZFR2Q9UPR6 939 aaKnown RBP13.17□□□□□ -0.3
SPAST-201ENST00000315285 TJP1Q07157 1748 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 EOGTQ5NDL2 527 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 MCEMP1Q8IX19 187 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 DENND6BQ8NEG7 585 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 OR51A7Q8NH64 312 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 SMPDL3BQ92485 455 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 ECHDC3Q96DC8 303 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 RAD9AQ99638 391 aa13.17□□□□□ -0.3
SPAST-201ENST00000315285 SH3D21A4FU49 640 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 IGLON5A6NGN9 336 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 ATXN1LP0C7T5 689 aaKnown RBP13.16□□□□□ -0.3
SPAST-201ENST00000315285 MAPK3P27361 379 aaPredicted RBP13.16□□□□□ -0.3
SPAST-201ENST00000315285 CNR2P34972 360 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 RGRP47804 291 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 PPP5CP53041 499 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 UGT3A2Q3SY77 523 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 TMEM35AQ53FP2 167 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 RUNDC3AQ59EK9 446 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 UNC5DQ6UXZ4 953 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 SLC9B2Q86UD5 537 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 JAGN1Q8N5M9 183 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 S100A16Q96FQ6 103 aaKnown RBP13.16□□□□□ -0.3
SPAST-201ENST00000315285 UBXN10Q96LJ8 280 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 SERINC1Q9NRX5 453 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 TAS2R10Q9NYW0 307 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 ZNF639Q9UID6 485 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 WRBO00258 174 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 KHNYNO15037 678 aaKnown RBP13.16□□□□□ -0.3
SPAST-201ENST00000315285 BCAS1O75363 584 aaPredicted RBP13.16□□□□□ -0.3
SPAST-201ENST00000315285 VEZF1Q14119 521 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.16□□□□□ -0.3
SPAST-201ENST00000315285 DCP2Q8IU60 420 aaKnown RBP13.16□□□□□ -0.3
SPAST-201ENST00000315285 TCEAL8Q8IYN2 117 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 LSMEM2Q8N112 164 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 SMIM14Q96QK8 99 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 BCL7BQ9BQE9 202 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 NTMT1Q9BV86 223 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 CXCL16Q9H2A7 254 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 GRHPRQ9UBQ7 328 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 STUB1Q9UNE7 303 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 GPR39O43194 453 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 LCKP06239 509 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 AGXTP21549 392 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 GADD45AP24522 165 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 GABRA3P34903 492 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 ARFRP1Q13795 201 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 ODF4Q2M2E3 257 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 PRAMEF17Q5VTA0 474 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 OR4C11Q6IEV9 310 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.16□□□□□ -0.3
SPAST-201ENST00000315285 ZNF550Q7Z398 422 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 ZNF227Q86WZ6 799 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 FAM83CQ9BQN1 747 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 ACPTQ9BZG2 426 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 ERVK-11Q9UQG0 969 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 UNC119BA6NIH7 251 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 ARHGDIBP52566 201 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 KIAA0319Q5VV43 1072 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 LRRC25Q8N386 305 aaPredicted RBP13.16□□□□□ -0.3
SPAST-201ENST00000315285 ZNF548Q8NEK5 533 aaPredicted RBP13.16□□□□□ -0.3
SPAST-201ENST00000315285 OR4K5Q8NGD3 323 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 OR8K5Q8NH50 307 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 PROKR1Q8TCW9 393 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 ZNF431Q8TF32 576 aaPredicted RBP13.16□□□□□ -0.3
SPAST-201ENST00000315285 RFT1Q96AA3 541 aa13.16□□□□□ -0.3
SPAST-201ENST00000315285 GAS2L1Q99501 681 aaPredicted RBP13.16□□□□□ -0.3
SPAST-201ENST00000315285 TAF1P21675 1872 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 MAST2Q6P0Q8 1798 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 KLHL33A6NCF5 533 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 C5orf51A6NDU8 294 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 LRRN3E7EW58 273 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 H3BSH0 61 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 GPR37L1O60883 481 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 SUOXP51687 545 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 SELENOWP63302 87 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 SEC23BQ15437 767 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 PAQR7Q86WK9 346 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 Q8N402 240 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms