RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 DLL1O00548 723 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 PEX12O00623 359 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 E2F3O00716 465 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 NUPL2O15504 423 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 RBBP9O75884 186 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 MAPK3P27361 379 aaPredicted RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 UGT2B10P36537 528 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 BMXP51813 675 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 FGL1Q08830 312 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 GPR68Q15743 365 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 LPAL2Q16609 132 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 MS4A13Q5J8X5 152 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 FAM182AQ5T1J6 154 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 WASH2PQ6VEQ5 465 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 HFE2Q6ZVN8 426 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 GAL3ST4Q96RP7 486 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 WRAP53Q9BUR4 548 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 RAB11FIP5Q9BXF6 653 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 KATNBL1Q9H079 304 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ABCG5Q9H222 651 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 SYT4Q9H2B2 425 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 CRTAC1Q9NQ79 661 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 NLKQ9UBE8 527 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 A6NHS1 94 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 CLDN4O14493 209 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 CREBL2O60519 120 aaPredicted RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 MSR1P21757 451 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 RBMXP38159 391 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 HNRNPDQ14103 355 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 PON3Q15166 354 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 CYBRD1Q53TN4 286 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 SLC9B2Q86UD5 537 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ZC3HC1Q86WB0 502 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 SCGB1C1Q8TD33 95 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 RBM18Q96H35 190 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 GDF15Q99988 308 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 GALPQ9UBC7 116 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 WNT16Q9UBV4 365 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 PCDHGB2Q9Y5G2 931 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 OR5K4A6NMS3 321 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 GFRA2O00451 464 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 SCAMP1O15126 338 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 TLX3O43711 291 aaPredicted RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 TBX18O95935 607 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 PAHP00439 452 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 HPRP00739 348 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 TGFB1P01137 390 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 NPPAP01160 153 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 CSTBP04080 98 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 SLC35G6P0C7Q6 338 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ZNF30P17039 623 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 AGTR1P30556 359 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ACTR1BP42025 376 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 MECP2P51608 486 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 ACTR1AP61163 376 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 SOX4Q06945 474 aaPredicted RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 ZNF616Q08AN1 781 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ELOAQ14241 798 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 CMPK2Q5EBM0 449 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ARSIQ5FYB1 569 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 TMEM69Q5SWH9 247 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ERN2Q76MJ5 926 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 NOXA1Q86UR1 476 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ESX1Q8N693 406 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 OR8K3Q8NH51 312 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 SLC6A7Q99884 636 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 OR10A4Q9H209 315 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 POT1Q9NUX5 634 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ASF1BQ9NVP2 202 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 COPZ2Q9P299 210 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 BAZ2AQ9UIF9 1905 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 CAPN5O15484 640 aaPredicted RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 RRP8O43159 456 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 OIP5O43482 229 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 NIPSNAP2O75323 286 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ITGA5P08648 1049 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 CELP19835 753 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 GSTM2P28161 218 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 HOXC13P31276 330 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 NCS1P62166 190 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 RPS24P62847 133 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 ABHD18Q0P651 414 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 POU4F3Q15319 338 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ZNF674Q2M3X9 581 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 LEXMQ3ZCV2 418 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 KANK2Q63ZY3 851 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ZNF529Q6P280 563 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 NAPRTQ6XQN6 538 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 DCDC5Q6ZRR9 648 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 BEND4Q6ZU67 534 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 OR13C4Q8NGS5 318 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 TBC1D15Q8TC07 691 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 STK35Q8TDR2 534 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 CYB5D2Q8WUJ1 264 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 CRYGNQ8WXF5 182 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 PYCR2Q96C36 320 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 COQ10AQ96MF6 247 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 CNTNAP3BQ96NU0 1288 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 KCNA7Q96RP8 456 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 SMOQ99835 787 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms