RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 MAGP20916 626 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 PTNP21246 168 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 CHMP24386 653 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 ZNF846Q147U1 533 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 KIAA1211LQ6NV74 962 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 WDR53Q7Z5U6 358 aaPredicted RBP10.96□□□□□ -0.66
PTPN2-201ENST00000309660 BCDIN3DQ7Z5W3 292 aaKnown RBP10.96□□□□□ -0.66
PTPN2-201ENST00000309660 ZNF675Q8TD23 568 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 COL26A1Q96A83 441 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 CAMK1GQ96NX5 476 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 MKRN2Q9H000 416 aaKnown RBP10.96□□□□□ -0.66
PTPN2-201ENST00000309660 OR51I1Q9H343 314 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 SFXN1Q9H9B4 322 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 NEUROD4Q9HD90 331 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 MRPS30Q9NP92 439 aaKnown RBP10.96□□□□□ -0.66
PTPN2-201ENST00000309660 FAIMQ9NVQ4 179 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 PSORS1C1Q9UIG5 152 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 CA5BQ9Y2D0 317 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 SCN3AQ9NY46 2000 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 A0A1W2PPV9 198 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 FFAR1O14842 300 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 DNAJB5O75953 348 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 RHCEP18577 417 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 KCNC4Q03721 635 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 TARDBPQ13148 414 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTPN2-201ENST00000309660 DNASE1L3Q13609 305 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 GPR19Q15760 415 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 DCST1Q5T197 706 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 OR4C11Q6IEV9 310 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 B3GNT7Q8NFL0 401 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 PHOSPHO2Q8TCD6 241 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 DOK4Q8TEW6 326 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 SLC35G5Q96KT7 338 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 DACH2Q96NX9 599 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 KLHL25Q9H0H3 589 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 OR51E2Q9H255 320 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 LHX9Q9NQ69 397 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 DNAAF2Q9NVR5 837 aaKnown RBP10.95□□□□□ -0.66
PTPN2-201ENST00000309660 TRNAU1APQ9NX07 287 aaKnown RBP10.95□□□□□ -0.66
PTPN2-201ENST00000309660 HMGN4O00479 90 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 CNOT3O75175 753 aaKnown RBP10.95□□□□□ -0.66
PTPN2-201ENST00000309660 VASPP50552 380 aaPredicted RBP10.95□□□□□ -0.66
PTPN2-201ENST00000309660 RAB28P51157 221 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 PCBP3P57721 371 aaKnown RBP10.95□□□□□ -0.66
PTPN2-201ENST00000309660 SLAMF1Q13291 335 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 GPAT3Q53EU6 434 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 ARMCX4Q5H9R4 360 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 TMEM31Q5JXX7 168 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 COLEC12Q5KU26 742 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 ZNF554Q86TJ5 538 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 LACC1Q8IV20 430 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 GPR32P1Q8NGA4 272 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 OR4E2Q8NGC2 313 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 OR52E1Q8NGJ3 308 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 WDR36Q8NI36 951 aaKnown RBP10.95□□□□□ -0.66
PTPN2-201ENST00000309660 NEURL3Q96EH8 262 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 PDXPQ96GD0 296 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 TREX2Q9BQ50 279 aaPredicted RBP10.95□□□□□ -0.66
PTPN2-201ENST00000309660 PRR14Q9BWN1 585 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 NECTIN3Q9NQS3 549 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 THSD1Q9NS62 852 aa10.95□□□□□ -0.66
PTPN2-201ENST00000309660 ZFR2Q9UPR6 939 aaKnown RBP10.95□□□□□ -0.66
PTPN2-201ENST00000309660 PGRMC2O15173 223 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 CHRM5P08912 532 aaPredicted RBP10.94□□□□□ -0.66
PTPN2-201ENST00000309660 CLDN2P57739 230 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 REEP5Q00765 189 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 PRDX1Q06830 199 aaKnown RBP10.94□□□□□ -0.66
PTPN2-201ENST00000309660 LRRC32Q14392 662 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 SEC23BQ15437 767 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 PARM1Q6UWI2 310 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 ZNF793Q6ZN11 406 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 FBXL6Q8N531 539 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 IQCF1Q8N6M8 205 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 OR2A1Q8NGT9 310 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 FGF14Q92915 247 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 SLC38A4Q969I6 547 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 GLIPR2Q9H4G4 154 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 PELI2Q9HAT8 420 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 SPHK1Q9NYA1 384 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 ERGIC3Q9Y282 383 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 LINC01565O15544 149 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 FRS3O43559 492 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 CDK1P06493 297 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 CKMT1AP12532 417 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 BMP4P12644 408 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 ZNF12P17014 697 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 CD72P21854 359 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 PPP2R1BP30154 601 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 BCL6P41182 706 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 LBX1P52954 281 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 CRISP1P54107 249 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 LSM11P83369 360 aaKnown RBP eCLIP10.94□□□□□ -0.66
PTPN2-201ENST00000309660 SLC9A5Q14940 896 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 FRMPD2BQ6IN97 320 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 NUDT18Q6ZVK8 323 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 UBE3DQ7Z6J8 389 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 ZNF607Q96SK3 696 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 PCBD2Q9H0N5 130 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 ABCB10Q9NRK6 738 aa10.94□□□□□ -0.66
PTPN2-201ENST00000309660 PMF1-BGLAPU3KQ54 211 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms