RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 LANCL3Q6ZV70 420 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 CLNKQ7Z7G1 428 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 KBTBD2Q8IY47 623 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 MORN4Q8NDC4 146 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 CDC26Q8NHZ8 85 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 M1APQ8TC57 530 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 ERP27Q96DN0 273 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 TSSK3Q96PN8 268 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 ING2Q9H160 280 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 TCF7L2Q9NQB0 619 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 KCNMB2Q9Y691 235 aa16.76■□□□□ 0.27
SSSCA1-201ENST00000309328 GLOD5A6NK44 160 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 ATP1B1P05026 303 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 SERPINA7P05543 415 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 CPMP14384 443 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 NTSP30990 170 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 MPIP34949 423 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 EFNA3P52797 238 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 AQP5P55064 265 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 CLDN8P56748 225 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 PDE7AQ13946 482 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 CEBPEQ15744 281 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 SPRED3Q2MJR0 410 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 LRRC25Q8N386 305 aaPredicted RBP16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 C8orf44Q96CB5 159 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 PPCDCQ96CD2 204 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 CHMP6Q96FZ7 201 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 IMMP1LQ96LU5 166 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 C1orf50Q9BV19 199 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 WDR55Q9H6Y2 383 aaPredicted RBP16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 MMP25Q9NPA2 562 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 SLC35C2Q9NQQ7 365 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 PNO1Q9NRX1 252 aaKnown RBP16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 HEY2Q9UBP5 337 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 TRIM33Q9UPN9 1127 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 PTPRQQ9UMZ3 2332 aa16.75■□□□□ 0.27
SSSCA1-201ENST00000309328 MAP1BP46821 2468 aaKnown RBP16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 OR2W5A6NFC9 320 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 ARGFXA6NJG6 315 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 CDK2AP1O14519 115 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 SCAMP2O15127 329 aaKnown RBP16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 UBDO15205 165 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 PRKRAO75569 313 aaKnown RBP16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 ERAL1O75616 437 aaKnown RBP16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 IFI6P09912 130 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 G6PDP11413 515 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 TNNI3P19429 210 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 TACR1P25103 407 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 SLC26A5P58743 744 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 RPS6KA2Q15349 733 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 SLC9B1Q4ZJI4 515 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 ATP1A1-AS1Q5TC04 95 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 MAVSQ7Z434 540 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 TICAM1Q8IUC6 712 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 TMEM151BQ8IW70 566 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 SHISA5Q8N114 240 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 GLB1L3Q8NCI6 653 aaPredicted RBP16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 B3GNT7Q8NFL0 401 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 ZFP28Q8NHY6 868 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 RIT1Q92963 219 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 ZNF317Q96PQ6 595 aaPredicted RBP16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 BBS4Q96RK4 519 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 WDR77Q9BQA1 342 aaPredicted RBP16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 BRINP2Q9C0B6 783 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 NSRP1Q9H0G5 558 aaKnown RBP16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 ZNF160Q9HCG1 818 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 FGFR1OP2Q9NVK5 253 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 AIG1Q9NVV5 245 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 TMEM45AQ9NWC5 275 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 FAM53CQ9NYF3 392 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 COPS7AQ9UBW8 275 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 ATP6V1HQ9UI12 483 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 TUBD1Q9UJT1 453 aa16.74■□□□□ 0.27
SSSCA1-201ENST00000309328 NUP210LQ5VU65 1888 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 GOLGA8QA0A0J9YX86 632 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 GOLGA8OA6NCC3 632 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 C17orf105B2RV13 164 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 GOLGA8NF8WBI6 632 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 TGFBR3LH3BV60 316 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 SEC24DO94855 1032 aaPredicted RBP16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 ALPPP05187 535 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 SFTPCP11686 197 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 MRPL19P49406 292 aaKnown RBP16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 IDH3AP50213 366 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 STX1BP61266 288 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 SRSF11Q05519 484 aaKnown RBP16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 PTGR1Q14914 329 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 BTBD16Q32M84 506 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 LSM12Q3MHD2 195 aaKnown RBP16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 VWA5B1Q5TIE3 1220 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 METTL21CQ5VZV1 264 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 CAMKMTQ7Z624 323 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 OR4N5Q8IXE1 308 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 GALNT12Q8IXK2 581 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 GALNT16Q8N428 558 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 ZBED6CLQ96FA7 236 aaPredicted RBP16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 VMP1Q96GC9 406 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 FBXL20Q96IG2 436 aa16.73■□□□□ 0.27
SSSCA1-201ENST00000309328 EGLN2Q96KS0 407 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms