RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 TMEM173Q86WV6 379 aaPredicted RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 SLC9A6Q92581 669 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 NEIL2Q969S2 332 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 RNF31Q96EP0 1072 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 HHIPQ96QV1 700 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 FNDC11Q9BVV2 318 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 ACAT2Q9BWD1 397 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 GPR52Q9Y2T5 361 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 CHD5Q8TDI0 1954 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 GPR37L1O60883 481 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 NCR1O76036 304 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 ALPPP05187 535 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 IL3P08700 152 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 CYP2A6P11509 494 aaPredicted RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 ALAS2P22557 587 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 LHCGRP22888 699 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 ETV5P41161 510 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 ETV1P50549 477 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 LIM2P55344 173 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 PPP3R1P63098 170 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 PIN1Q13526 163 aaPredicted RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 IRF5Q13568 498 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 GLYR1Q49A26 553 aaPredicted RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 SPOUT1Q5T280 376 aaKnown RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 ZNF767PQ75MW2 155 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 RRM2BQ7LG56 351 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 GPR155Q7Z3F1 870 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 LHFPL3Q86UP9 236 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 MARCH9Q86YJ5 346 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 RBM45Q8IUH3 476 aaKnown RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 LILRA3Q8N6C8 439 aaPredicted RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 CLDN22Q8N7P3 220 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 LRRC20Q8TCA0 184 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 SOCS4Q8WXH5 440 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 SCRN2Q96FV2 425 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 BRF2Q9HAW0 419 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 RBFOX1Q9NWB1 397 aaKnown RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 UCKL1Q9NWZ5 548 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 ZNF624Q9P2J8 865 aaPredicted RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 TMEM202A6NGA9 273 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 H0YIV9 168 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 GFYI3L273 518 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 SLC16A5O15375 505 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 TSPAN6O43657 245 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 ARAFP10398 606 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 ENDOUP21128 410 aaKnown RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 RPL3P39023 403 aaKnown RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 PTSQ03393 145 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 MRPL58Q14197 206 aaKnown RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 P2RY14Q15391 338 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 SEC23BQ15437 767 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 TXNDC8Q6A555 127 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 KRT74Q7RTS7 529 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 LRRC17Q8N6Y2 441 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 TMEM19Q96HH6 336 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 MAP6Q96JE9 813 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 QRFPRQ96P65 431 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 SLC22A12Q96S37 553 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 KLHL21Q9UJP4 597 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 A0A0G2JMP0 313 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 A0A0X1KG70 313 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 SNTNA6NMZ2 147 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 WASHC1A8K0Z3 465 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 PRKYO43930 277 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 CSNK1DP48730 415 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 WNT4P56705 351 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 SNRPGP62308 76 aaKnown RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 ILKQ13418 452 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 Q6ZVL8 140 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 WDR53Q7Z5U6 358 aaPredicted RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 OR52I1Q8NGK6 324 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 C16orf78Q8WTQ4 265 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 BTN2A2Q8WVV5 523 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 XAGE5Q8WWM1 108 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 KATNB1Q9BVA0 655 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 SORBS1Q9BX66 1292 aaKnown RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 MED28Q9H204 178 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 RC3H2Q9HBD1 1191 aaKnown RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 PLEKHB1Q9UF11 243 aaPredicted RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 TMEM88BA6NKF7 163 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 I3L521 148 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 HCN1O60741 890 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 C1QBP02746 253 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 CKBP12277 381 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 DDX5P17844 614 aaKnown RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 HLA-DMAP28067 261 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 SPINT3P49223 89 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 MVDP53602 400 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 LIMK1P53667 647 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 SRP54P61011 504 aaKnown RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 WDR5P61964 334 aaKnown RBP10.6□□□□□ -0.71
PTPN7-201ENST00000309017 LMAN2Q12907 356 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 CLEC12AQ5QGZ9 265 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 MZT2AQ6P582 158 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 LAS2Q8IYD9 372 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 SLC38A6Q8IZM9 456 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 MMP21Q8N119 569 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 AKAP1Q92667 903 aaKnown RBP eCLIP10.6□□□□□ -0.711e-5■■■■□ 24.5
PTPN7-201ENST00000309017 ART5Q96L15 291 aa10.6□□□□□ -0.71
PTPN7-201ENST00000309017 SAMD11Q96NU1 681 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms