RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 EIF2S1P05198 315 aaKnown RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ALOX5P09917 674 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 LINC00032P0C843 101 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 THEGLP0DJG4 465 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 PKMP14618 531 aaKnown RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ITGB6P18564 788 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 GGT1P19440 569 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 CRHBPP24387 322 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 HRH2P25021 359 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 EEF1DP29692 281 aaKnown RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 STT3AP46977 705 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 TTPAP49638 278 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 BCAP31P51572 246 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF140P52738 457 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 CDH13P55290 713 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 TMPRSS3P57727 454 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 KRTAP10-11P60412 298 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 CXCR4P61073 352 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ST8SIA6P61647 398 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 E2F1Q01094 437 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 DSC2Q02487 901 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 OCA2Q04671 838 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ITKQ08881 620 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 SLC10A7Q0GE19 358 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 FOXL1Q12952 345 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 CDH18Q13634 790 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 FZD2Q14332 565 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ELAVL3Q14576 367 aaKnown RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF235Q14590 738 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF846Q147U1 533 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 POLD3Q15054 466 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 TAF1AQ15573 450 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 TGFBIQ15582 683 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ISXQ2M1V0 245 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 LINC00303Q3SY05 128 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ATP6AP1LQ52LC2 224 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 PAGE3Q5JUK9 113 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 CDKL4Q5MAI5 379 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 C6orf136Q5SQH8 315 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 C6orf141Q5SZD1 244 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 GPR107Q5VW38 600 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 GLYATQ6IB77 296 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 UGT3A1Q6NUS8 523 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 FBXL22Q6P050 247 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 DUS1LQ6P1R4 473 aaKnown RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 GUSBP11Q6P575 273 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 CRTC1Q6UUV9 634 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 DLEU7Q6UYE1 221 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 TMEM26Q6ZUK4 368 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 GPRIN3Q6ZVF9 776 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 RPS27LQ71UM5 84 aaKnown RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ABI3BPQ7Z7G0 1075 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 SYVN1Q86TM6 617 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ANKRD13BQ86YJ7 626 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 HIPK1Q86Z02 1210 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 LURAP1LQ8IV03 231 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 D2HGDHQ8N465 521 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 CHST14Q8NCH0 376 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF555Q8NEP9 628 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 OR14K1Q8NGZ2 314 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 PROKR1Q8TCW9 393 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 KCNJ9Q92806 393 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ABTB1Q969K4 478 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 FUBP1Q96AE4 644 aaKnown RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 HMCESQ96FZ2 354 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 CDKN2AIPNLQ96HQ2 116 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 PPP3R2Q96LZ3 170 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 SLC46A1Q96NT5 459 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 PSKH2Q96QS6 385 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 CGREF1Q99674 301 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 RBM4BQ9BQ04 359 aaKnown RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 MGME1Q9BQP7 344 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 SLC39A3Q9BRY0 314 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 RBM4Q9BWF3 364 aaKnown RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 UNKQ9C0B0 810 aaKnown RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 WDR12Q9GZL7 423 aaKnown RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ING2Q9H160 280 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 TCEAL2Q9H3H9 227 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 RAD21L1Q9H4I0 556 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 CLMPQ9H6B4 373 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 NTN4Q9HB63 628 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 HMG20AQ9NP66 347 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 NECTIN3Q9NQS3 549 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 RHBDL2Q9NX52 303 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 NUDT4Q9NZJ9 180 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 MPP6Q9NZW5 540 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 SATB2Q9UPW6 733 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ERGIC3Q9Y282 383 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 COQ6Q9Y2Z9 468 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF711Q9Y462 761 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ENTPD2Q9Y5L3 495 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 AP1M2Q9Y6Q5 423 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 TNRC6AQ8NDV7 1962 aaKnown RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 SHANK1Q9Y566 2161 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 CROCCQ5TZA2 2017 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 SPTBP11277 2137 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 ESPL1Q14674 2120 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 SEC16AO15027 2179 aa4.66□□□□□ -1.66
CKS1B-201ENST00000308987 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-201ENST00000308987 A0A1W2PPW3 197 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms