RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 PSMG4Q5JS54 123 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 FAM209AQ5JX71 171 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 B3GLCTQ6Y288 498 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 C7orf61Q8IZ16 206 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 RGL4Q8IZJ4 473 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 OR52K2Q8NGK3 314 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 OR10G6Q8NH81 332 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 SLC7A6Q92536 515 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 SPTSSAQ969W0 71 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ZNF566Q969W8 418 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 ZNF689Q96CS4 500 aaPredicted RBP3.86□□□□□ -1.79
USH2A-201ENST00000307340 KCNS3Q9BQ31 491 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 MED18Q9BUE0 208 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 GPRC5CQ9NQ84 441 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 IL7P13232 177 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 MTNR1AP48039 350 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 FAM171BQ6P995 826 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ZNF354BQ96LW1 612 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 TXLNGYQ9BZA5 131 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ZNF436Q9C0F3 470 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 OSGEPL1Q9H4B0 414 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 KLHL9Q9P2J3 617 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 NPFFR2Q9Y5X5 522 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 UNC13CQ8NB66 2214 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 OR6C74A6NCV1 312 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 PRAMEF11O60813 436 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 MED6O75586 246 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 DIRAS1O95057 198 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 FUCA1P04066 466 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 RABIFP47224 123 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SMAD3P84022 425 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 ARHGAP8P85298 464 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 OGDHQ02218 1023 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 AIMP2Q13155 320 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 DGCR6Q14129 220 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 HIST2H3AQ71DI3 136 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 GOT1L1Q8NHS2 421 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 MED30Q96HR3 178 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 MYRFLQ96LU7 910 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 TSSK2Q96PF2 358 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 RBP7Q96R05 134 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 AGPAT4Q9NRZ5 378 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 CDK14O94921 469 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 STSP08842 583 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 FRKP42685 505 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 WNT4P56705 351 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 RAB4BP61018 213 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 VGLL4Q14135 290 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SERPINA9Q86WD7 417 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 OR10A6Q8NH74 314 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 FAM216AQ8WUB2 273 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 NSMAFQ92636 917 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SLC12A9Q9BXP2 914 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 HIPK2Q9H2X6 1198 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SLC17A5Q9NRA2 495 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 IGKV6D-21A0A0A0MT36 114 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 IGLON5A6NGN9 336 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 FMO6PO60774 539 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SLC22A5O76082 557 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 CASP1P29466 404 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ZNF84P51523 738 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 WDR45BQ5MNZ6 344 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 TAF8Q7Z7C8 310 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 FBXO16Q8IX29 292 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 SLC38A3Q99624 504 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 MARCH7Q9H992 704 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 CYP4F12Q9HCS2 524 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 A0A1W2PPH5 198 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 OR1I1O60431 355 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 GPR137BO60478 399 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 HBE1P02100 147 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 CREB1P16220 341 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 CPN2P22792 545 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 TFAP2DQ7Z6R9 452 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 C10orf35Q96D05 121 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 RCN3Q96D15 328 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 OR2M2Q96R28 347 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SLC35A5Q9BS91 424 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 OAZ3Q9UMX2 235 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 UGT1A9O60656 530 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 PAHP00439 452 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 UGT1A6P19224 532 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 RAB28P51157 221 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 ZNF41P51814 821 aaPredicted RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 ART1P52961 327 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 HNRNPKP61978 463 aaKnown RBP eCLIP3.85□□□□□ -1.79
USH2A-201ENST00000307340 BTKQ06187 659 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SCARB2Q14108 478 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SLC39A12Q504Y0 691 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 CEP68Q76N32 757 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SYT13Q7L8C5 426 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SPRED1Q7Z699 444 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SLC43A3Q8NBI5 491 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 TSEN2Q8NCE0 465 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 UGT1A7Q9HAW7 530 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 UGT1A10Q9HAW8 530 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 UGT1A8Q9HAW9 530 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 C2orf92A0A1B0GVN3 265 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 KLK7P49862 253 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SLC5A11Q8WWX8 675 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms