RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 CCT3P49368 545 aaKnown RBP16.52■□□□□ 0.23
KRT28-201ENST00000306658 CDK9P50750 372 aaKnown RBP16.52■□□□□ 0.23
KRT28-201ENST00000306658 XKP51811 444 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 ITGA1P56199 1179 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 SHC2P98077 582 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 VMACQ2NL98 169 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 SAXO2Q658L1 398 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 BHLHB9Q6PI77 547 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 PRR23CQ6ZRP0 262 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 TMPRSS9Q7Z410 1059 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 ARHGAP22Q7Z5H3 698 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 PACS2Q86VP3 889 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 LRRC25Q8N386 305 aaPredicted RBP16.52■□□□□ 0.23
KRT28-201ENST00000306658 OR52E4Q8NGH9 312 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 SUN3Q8TAQ9 357 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 POP5Q969H6 163 aaKnown RBP16.52■□□□□ 0.23
KRT28-201ENST00000306658 NEURL3Q96EH8 262 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 FGF21Q9NSA1 209 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 SIRT3Q9NTG7 399 aaPredicted RBP16.52■□□□□ 0.23
KRT28-201ENST00000306658 CUTCQ9NTM9 273 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 ACSL6Q9UKU0 697 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 AP4S1Q9Y587 144 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 CACNA1HO95180 2353 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 GPR179Q6PRD1 2367 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 DHRS12A0PJE2 317 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 BLACEA4D250 179 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 H3BMH7 237 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 GPIP06744 558 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 CKMT2P17540 419 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 MVDP53602 400 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 SESN3P58005 492 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 VEZF1Q14119 521 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 TMEM64Q6YI46 380 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 RNF130Q86XS8 419 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 ZZZ3Q8IYH5 903 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 OR1L3Q8NH93 324 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 RHBDD1Q8TEB9 315 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 NCLNQ969V3 563 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 FAM162AQ96A26 154 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 MOAP1Q96BY2 351 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 MVB12AQ96EY5 273 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 MMABQ96EY8 250 aaPredicted RBP16.51■□□□□ 0.23
KRT28-201ENST00000306658 CNDP2Q96KP4 475 aaKnown RBP16.51■□□□□ 0.23
KRT28-201ENST00000306658 GFM1Q96RP9 751 aaKnown RBP16.51■□□□□ 0.23
KRT28-201ENST00000306658 CHST8Q9H2A9 424 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 EPS8L2Q9H6S3 715 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 GPATCH2Q9NW75 528 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 FAF1Q9UNN5 650 aaPredicted RBP16.51■□□□□ 0.23
KRT28-201ENST00000306658 MRPS33Q9Y291 106 aaKnown RBP16.51■□□□□ 0.23
KRT28-201ENST00000306658 MAP4K5Q9Y4K4 846 aa16.51■□□□□ 0.23
KRT28-201ENST00000306658 IGHV5-10-1A0A0J9YXX1 117 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 CREG1O75629 220 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 MED26O95402 600 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 ZNF806P0C7X5 589 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 IL10P22301 178 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 PPP2R1BP30154 601 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 PRIM2P49643 509 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 ARSFP54793 590 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 ACY1Q03154 408 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 COL9A2Q14055 689 aaPredicted RBP16.5■□□□□ 0.23
KRT28-201ENST00000306658 ZNF750Q32MQ0 723 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 IRAK1BP1Q5VVH5 260 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 YOD1Q5VVQ6 348 aaPredicted RBP16.5■□□□□ 0.23
KRT28-201ENST00000306658 C6orf120Q7Z4R8 191 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 PTOV1Q86YD1 416 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 SFXN5Q8TD22 340 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 CANT1Q8WVQ1 401 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 NDC1Q9BTX1 674 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 C3orf14Q9HBI5 128 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 CCM2LQ9NUG4 571 aaPredicted RBP16.5■□□□□ 0.23
KRT28-201ENST00000306658 C6orf203Q9P0P8 240 aaPredicted RBP16.5■□□□□ 0.23
KRT28-201ENST00000306658 RAPGEFL1Q9UHV5 662 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 CDC14AQ9UNH5 594 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 TCRBV5S2A0A599 114 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 GPR75O95800 540 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 GP1BAP07359 652 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 PORP16435 677 aaPredicted RBP16.5■□□□□ 0.23
KRT28-201ENST00000306658 FOLH1Q04609 750 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 RBBP4Q09028 425 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 ADRM1Q16186 407 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 COX20Q5RI15 118 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 GCNT6Q5T4J0 391 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 TTLL10Q6ZVT0 673 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 C11orf65Q8NCR3 313 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 ZNF501Q96CX3 271 aaPredicted RBP16.5■□□□□ 0.23
KRT28-201ENST00000306658 ARMC1Q9NVT9 282 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 HCN3Q9P1Z3 774 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 ANAPC2Q9UJX6 822 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 AURKCQ9UQB9 309 aa16.5■□□□□ 0.23
KRT28-201ENST00000306658 FAM227AF5H4B4 570 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 CLDN4O14493 209 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 TNFRSF21O75509 655 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 ETFAP13804 333 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 CPMP14384 443 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 ALAS2P22557 587 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 GCKP35557 465 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 MAGEA8P43361 318 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 PTDSS1P48651 473 aaKnown RBP16.49■□□□□ 0.23
KRT28-201ENST00000306658 PRR5P85299 388 aa16.49■□□□□ 0.23
KRT28-201ENST00000306658 DUSP2Q05923 314 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms