RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 PCDHA9Q9Y5H5 950 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ZNF780BQ9Y6R6 833 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 CACNA1GO43497 2377 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 LOC400499M0QZD8 3231 aa10.28□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TRBV11-1A0A0K0K1C0 115 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 DYTNA2CJ06 578 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 A8MUI8 341 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 NPIPB8E9PQR5 432 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PGRMC2O15173 223 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 DDX5P17844 614 aaKnown RBP10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ARG2P78540 354 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 IGLV3-21P80748 117 aaPredicted RBP10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 C2orf80Q0P641 193 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 KLRB1Q12918 225 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MAD2L1Q13257 205 aaPredicted RBP10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MFAP5Q13361 173 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MEP1AQ16819 746 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 XKR7Q5GH72 579 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CES4AQ5XG92 561 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 LINC00696Q6ZRV3 163 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 IKBIPQ70UQ0 350 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PTRH1Q86Y79 214 aaKnown RBP10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SAMD14Q8IZD0 417 aaPredicted RBP10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 FNDC5Q8NAU1 212 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MORN4Q8NDC4 146 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 OR2T11Q8NH01 316 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SLC2A12Q8TD20 617 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PPP1R36Q96LQ0 422 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SORT1Q99523 831 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CNPPD1Q9BV87 410 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 DEFB126Q9BYW3 111 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 OR8D2Q9GZM6 311 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MYNNQ9NPC7 610 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 INTS9Q9NV88 658 aaKnown RBP10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 UTS2RQ9UKP6 389 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CCL27Q9Y4X3 112 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CLDN16Q9Y5I7 305 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 FAM208BQ5VWN6 2430 aa10.27□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ATP6AP2A0A1C7CYW4 349 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SLCO1B7G3V0H7 640 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 K7EM74 188 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 FCHO1O14526 889 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PEX11AO75192 247 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ATP6AP2O75787 350 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PDGFAP04085 211 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PRB1P04280 392 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SLC35E2P0CK97 266 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 KITP10721 976 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CPMP14384 443 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PORP16435 677 aaPredicted RBP10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 DDCP20711 480 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 NT5EP21589 574 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 NTSP30990 170 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 GALNSP34059 522 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CASRP41180 1078 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ASMTP46597 345 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 XKP51811 444 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SPRED3Q2MJR0 410 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 UGT3A2Q3SY77 523 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ATG14Q6ZNE5 492 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 Q6ZSR9 355 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CRLF3Q8IUI8 442 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 GALNT12Q8IXK2 581 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MMP21Q8N119 569 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 LRRC25Q8N386 305 aaPredicted RBP10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 KIF2BQ8N4N8 673 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ELP5Q8TE02 316 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 RIT1Q92963 219 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 EXOSC8Q96B26 276 aaKnown RBP10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 C11orf24Q96F05 449 aaPredicted RBP10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 LMF1Q96S06 567 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 BRINP2Q9C0B6 783 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 C20orf27Q9GZN8 174 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ZNF395Q9H8N7 513 aaPredicted RBP10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 EHD3Q9NZN3 535 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MARCOQ9UEW3 520 aaPredicted RBP10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 HAO1Q9UJM8 370 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ANAPC2Q9UJX6 822 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 WBP11Q9Y2W2 641 aaKnown RBP10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 COL6A6A6NMZ7 2263 aa10.26□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ZZEF1O43149 2961 aa10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MGAQ8IWI9 3026 aa10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 TRPC5OSA6NMA1 111 aa10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 KLF11O14901 512 aa10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SNNO75324 88 aaPredicted RBP10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 VPS4BO75351 444 aa10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ZFAND5O76080 213 aa10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PRPS2P11908 318 aa10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SDC1P18827 310 aa10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CSNK2A2P19784 350 aaPredicted RBP10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SOX11P35716 441 aa10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 HPCAL1P37235 193 aa10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 RPL3P39023 403 aaKnown RBP10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 FEN1P39748 380 aaKnown RBP10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 HK2P52789 917 aa10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ERVK-8P63133 956 aa10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 C19orf57Q0VDD7 668 aa10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ZNF267Q14586 743 aaPredicted RBP10.25□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 KIAA0040Q15053 153 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms