RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 LSRQ86X29 649 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-204ENST00000300862 ETFBKMTQ8IXQ9 262 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 OR5D16Q8NGK9 328 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 UBE2E3Q969T4 207 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 ZNF707Q96C28 371 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-204ENST00000300862 MTERF3Q96E29 417 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 PDXPQ96GD0 296 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 LINC00615Q96LM1 132 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-204ENST00000300862 DNAJC27Q9NZQ0 273 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 DEC1Q9P2X7 70 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 FTSJ1Q9UET6 329 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 HEATR5BQ9P2D3 2071 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 C17orf113A0A1B0GUU1 675 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 AGAP5A6NIR3 686 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 GLOD5A6NK44 160 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 DYRK3O43781 588 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 CKMT1AP12532 417 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 KELP23276 732 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 P2RY2P41231 377 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 TSTQ16762 297 aaKnown RBP12.25□□□□□ -0.45
HIF3A-204ENST00000300862 ZNF770Q6IQ21 691 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-204ENST00000300862 TCTN3Q6NUS6 607 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 LCTLQ6UWM7 567 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 MAMSTRQ6ZN01 415 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 ADCK2Q7Z695 626 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 DCUN1D3Q8IWE4 304 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 WDR36Q8NI36 951 aaKnown RBP12.25□□□□□ -0.45
HIF3A-204ENST00000300862 CXorf40AQ8TE69 158 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 WFIKKN2Q8TEU8 576 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 SETD7Q8WTS6 366 aaKnown RBP12.25□□□□□ -0.45
HIF3A-204ENST00000300862 TP53INP1Q96A56 240 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 ZNF514Q96K75 400 aaPredicted RBP12.25□□□□□ -0.45
HIF3A-204ENST00000300862 NDEL1Q9GZM8 345 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 XKR8Q9H6D3 395 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 ANKHQ9HCJ1 492 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 LHX9Q9NQ69 397 aa12.25□□□□□ -0.45
HIF3A-204ENST00000300862 SZT2Q5T011 3432 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 EDDM13A0A1B0GTR0 161 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 IGLON5A6NGN9 336 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 ZAR1LA6NP61 321 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 ANHXE9PGG2 379 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 SCAMP1O15126 338 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 PDPK1O15530 556 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 HOXC11O43248 304 aaPredicted RBP12.24□□□□□ -0.45
HIF3A-204ENST00000300862 OR1F1O43749 312 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 LCMT2O60294 686 aaKnown RBP12.24□□□□□ -0.45
HIF3A-204ENST00000300862 OR10H3O60404 316 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 ENTPD6O75354 484 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 MFN2O95140 757 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 ALPPL2P10696 532 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 WASP42768 502 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 LSM11P83369 360 aaKnown RBP eCLIP12.24□□□□□ -0.45
HIF3A-204ENST00000300862 DPTQ07507 201 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 ELOAQ14241 798 aaKnown RBP12.24□□□□□ -0.45
HIF3A-204ENST00000300862 SAXO2Q658L1 398 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 UNC5DQ6UXZ4 953 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 USP43Q70EL4 1123 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 IKBIPQ70UQ0 350 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 ERN2Q76MJ5 926 aaKnown RBP12.24□□□□□ -0.45
HIF3A-204ENST00000300862 COMTD1Q86VU5 262 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 CYP4Z2PQ8N1L4 340 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 PSD4Q8NDX1 1056 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 TMIEQ8NEW7 156 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 NEURL3Q96EH8 262 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 MS4A8Q9BY19 250 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 MMP27Q9H306 513 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 SERHL2Q9H4I8 314 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 CTPS2Q9NRF8 586 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 SIRT3Q9NTG7 399 aaPredicted RBP12.24□□□□□ -0.45
HIF3A-204ENST00000300862 GPR34Q9UPC5 381 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 SLC27A6Q9Y2P4 619 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 OR1A2Q9Y585 309 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 KIAA1549LQ6ZVL6 1849 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 ANKRD34BA5PLL1 514 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 H3BN98 237 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 NDUFB5O43674 189 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 UGT2B10P36537 528 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 CLCNKAP51800 687 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 TUBA1BP68363 451 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 IRF3Q14653 427 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 SYPL1Q16563 259 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 GAB4Q2WGN9 574 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 TPRG1LQ5T0D9 272 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 TUBA1AQ71U36 451 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 UTS2BQ765I0 119 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 APOBEC4Q8WW27 367 aaKnown RBP12.24□□□□□ -0.45
HIF3A-204ENST00000300862 KLK6Q92876 244 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 RAD9AQ99638 391 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 MGLLQ99685 303 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 AIF1LQ9BQI0 150 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 YIPF4Q9BSR8 244 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 KCNK12Q9HB15 430 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 NEK6Q9HC98 313 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 IL23AQ9NPF7 189 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 AHSPQ9NZD4 102 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 CLEC2DQ9UHP7 191 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 ICKQ9UPZ9 632 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 UGT2A1Q9Y4X1 527 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 PCDHGA3Q9Y5H0 932 aa12.24□□□□□ -0.45
HIF3A-204ENST00000300862 PRAMEF27A3QJZ7 478 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms