RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 APIPQ96GX9 242 aa19.8■□□□□ 0.76
SMCO4-201ENST00000298966 GBP5Q96PP8 586 aa19.8■□□□□ 0.76
SMCO4-201ENST00000298966 TRAPPC9Q96Q05 1148 aa19.8■□□□□ 0.76
SMCO4-201ENST00000298966 C1orf50Q9BV19 199 aa19.8■□□□□ 0.76
SMCO4-201ENST00000298966 CADM1Q9BY67 442 aaKnown RBP19.8■□□□□ 0.76
SMCO4-201ENST00000298966 CHRNA10Q9GZZ6 450 aa19.8■□□□□ 0.76
SMCO4-201ENST00000298966 CCDC167Q9P0B6 97 aa19.8■□□□□ 0.76
SMCO4-201ENST00000298966 ADAM29Q9UKF5 820 aa19.8■□□□□ 0.76
SMCO4-201ENST00000298966 NDUFAF1Q9Y375 327 aa19.8■□□□□ 0.76
SMCO4-201ENST00000298966 CSAG2Q9Y5P2 127 aa19.8■□□□□ 0.76
SMCO4-201ENST00000298966 H0YHG0 523 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 GSC2O15499 205 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 KRT16P08779 473 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 STSP08842 583 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 BCKDHAP12694 445 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 PVRP15151 417 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 TIA1P31483 386 aaKnown RBP eCLIP19.79■□□□□ 0.76
SMCO4-201ENST00000298966 RPL3P39023 403 aaKnown RBP19.79■□□□□ 0.76
SMCO4-201ENST00000298966 DCDP81605 110 aaKnown RBP19.79■□□□□ 0.76
SMCO4-201ENST00000298966 IRAK1BP1Q5VVH5 260 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 FIGLAQ6QHK4 219 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 BLOC1S3Q6QNY0 202 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 GK5Q6ZS86 529 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 ANKRD53Q8N9V6 530 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 PCYOX1LQ8NBM8 494 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 DNAJB14Q8TBM8 379 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 PROKR1Q8TCW9 393 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 MRPL1Q9BYD6 325 aaKnown RBP19.79■□□□□ 0.76
SMCO4-201ENST00000298966 DPY30Q9C005 99 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 MCM8Q9UJA3 840 aa19.79■□□□□ 0.76
SMCO4-201ENST00000298966 URADA6NGE7 173 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 ANKRD28O15084 1053 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 OR2B3O76000 313 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 DDX5P17844 614 aaKnown RBP19.78■□□□□ 0.76
SMCO4-201ENST00000298966 PRPS1L1P21108 318 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 POLR2JP52435 117 aaKnown RBP19.78■□□□□ 0.76
SMCO4-201ENST00000298966 STXBP1P61764 594 aaKnown RBP19.78■□□□□ 0.76
SMCO4-201ENST00000298966 YBX1P67809 324 aaKnown RBP19.78■□□□□ 0.76
SMCO4-201ENST00000298966 RGS1Q08116 209 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 ART3Q13508 389 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 PWP1Q13610 501 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 ZIC1Q15915 447 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 B3GNTL1Q67FW5 361 aaPredicted RBP19.78■□□□□ 0.76
SMCO4-201ENST00000298966 RHBDD2Q6NTF9 364 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 PAOXQ6QHF9 649 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 C16orf89Q6UX73 402 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 HACD2Q6Y1H2 254 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 VN1R5Q7Z5H4 357 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 FUNDC1Q8IVP5 155 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 LIX1Q8N485 282 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 ZNF655Q8N720 491 aaPredicted RBP19.78■□□□□ 0.76
SMCO4-201ENST00000298966 FBXO27Q8NI29 283 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 CREB3L4Q8TEY5 395 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 UTP4Q969X6 686 aaKnown RBP19.78■□□□□ 0.76
SMCO4-201ENST00000298966 RGMAQ96B86 450 aa19.78■□□□□ 0.76
SMCO4-201ENST00000298966 A0A1W2PP18 115 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 HAT1O14929 419 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 ANGPT2O15123 496 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 CFLARO15519 480 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 NRP2O60462 931 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 TGFB1P01137 390 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 NPPAP01160 153 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 IL6P05231 212 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 SDC1P18827 310 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 MAGP20916 626 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 PTGER4P35408 488 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 BCL6P41182 706 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 RAP1GDS1P52306 607 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 ZNF169Q14929 603 aaPredicted RBP19.77■□□□□ 0.76
SMCO4-201ENST00000298966 SLC9A5Q14940 896 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 ADPRMQ3LIE5 342 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 MMEL1Q495T6 779 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 MSANTD1Q6ZTZ1 278 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 IKBIPQ70UQ0 350 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 RNF44Q7L0R7 432 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 C1orf52Q8N6N3 182 aaKnown RBP19.77■□□□□ 0.76
SMCO4-201ENST00000298966 NT5CQ8TCD5 201 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 MCUR1Q96AQ8 359 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 TESCQ96BS2 214 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 ROPN1LQ96C74 230 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 RCN3Q96D15 328 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 SPDL1Q96EA4 605 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 ZFYVE21Q9BQ24 234 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 KLF2Q9Y5W3 355 aaPredicted RBP19.77■□□□□ 0.76
SMCO4-201ENST00000298966 MED13LQ71F56 2210 aa19.77■□□□□ 0.76
SMCO4-201ENST00000298966 FEZF1A0PJY2 475 aa19.76■□□□□ 0.75
SMCO4-201ENST00000298966 ETHE1O95571 254 aa19.76■□□□□ 0.75
SMCO4-201ENST00000298966 SLC35G6P0C7Q6 338 aa19.76■□□□□ 0.75
SMCO4-201ENST00000298966 ITGAXP20702 1163 aa19.76■□□□□ 0.75
SMCO4-201ENST00000298966 TRA2BP62995 288 aaKnown RBP19.76■□□□□ 0.75
SMCO4-201ENST00000298966 ZNF763Q0D2J5 394 aa19.76■□□□□ 0.75
SMCO4-201ENST00000298966 ZC3H12BQ5HYM0 836 aaKnown RBP19.76■□□□□ 0.75
SMCO4-201ENST00000298966 AGAP7PQ5VUJ5 663 aa19.76■□□□□ 0.75
SMCO4-201ENST00000298966 FCRL6Q6DN72 434 aa19.76■□□□□ 0.75
SMCO4-201ENST00000298966 ADNP2Q6IQ32 1131 aa19.76■□□□□ 0.75
SMCO4-201ENST00000298966 FAM180AQ6UWF9 173 aa19.76■□□□□ 0.75
SMCO4-201ENST00000298966 IGFL2Q6UWQ7 119 aa19.76■□□□□ 0.75
SMCO4-201ENST00000298966 COMMD6Q7Z4G1 85 aa19.76■□□□□ 0.75
SMCO4-201ENST00000298966 ASPGQ86U10 573 aa19.76■□□□□ 0.75
SMCO4-201ENST00000298966 NUDT13Q86X67 352 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms