RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ZNF304Q9HCX3 659 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 TXLNGQ9NUQ3 528 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 SIRT5Q9NXA8 310 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 TEX10Q9NXF1 929 aaPredicted RBP5.55□□□□□ -1.52
SSX3-201ENST00000298396 HEY2Q9UBP5 337 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 VPS29Q9UBQ0 182 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ADAM29Q9UKF5 820 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 PADI1Q9ULC6 663 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 DAPP1Q9UN19 280 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ATG4BQ9Y4P1 393 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 PCDHGA6Q9Y5G7 932 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 BOD1L1Q8NFC6 3051 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 IGKV3D-11A0A0A0MRZ8 115 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 GOLGA8QA0A0J9YX86 632 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 MYOCOSA0A1B0GUC4 107 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 A0A1W2PR48 441 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 GOLGA8OA6NCC3 632 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 GOLGA8NF8WBI6 632 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 SLC28A1O00337 649 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 SOCS6O14544 535 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 PGRMC2O15173 223 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 GSC2O15499 205 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 PROM1O43490 865 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 B3GALT2O43825 422 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 PCDH7O60245 1069 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 EDF1O60869 148 aaKnown RBP5.54□□□□□ -1.52
SSX3-201ENST00000298396 CRCPO75575 148 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 CDC123O75794 336 aaPredicted RBP5.54□□□□□ -1.52
SSX3-201ENST00000298396 RSL1D1O76021 490 aaKnown RBP5.54□□□□□ -1.52
SSX3-201ENST00000298396 HTR3BO95264 441 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 AIFM1O95831 613 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 FHP07954 510 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 ALDOCP09972 364 aaKnown RBP5.54□□□□□ -1.52
SSX3-201ENST00000298396 ZGLP1P0C6A0 271 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 FAM58BPP0C7Q3 252 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 NEFHP12036 1026 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 CD1EP15812 388 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 SDC1P18827 310 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 TCN2P20062 427 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 RAB6AP20340 208 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 PTPN4P29074 926 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 TIA1P31483 386 aaKnown RBP eCLIP5.54□□□□□ -1.52
SSX3-201ENST00000298396 AVPR1BP47901 424 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 RAP1GDS1P52306 607 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 ARFIP1P53367 373 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 MTTPP55157 894 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 RAB38P57729 211 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 BTG2P78543 158 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 PHEXP78562 749 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 MC1RQ01726 317 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 TNFRSF17Q02223 184 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 TLE3Q04726 772 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 DUSP2Q05923 314 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 KLC1Q07866 573 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 SLAMF1Q13291 335 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 GALNTL6Q49A17 601 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 C6orf136Q5SQH8 315 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 MLIPQ5VWP3 458 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 FAM71E1Q6IPT2 247 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 GALNT18Q6P9A2 607 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 PAOXQ6QHF9 649 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 LANCL3Q6ZV70 420 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 PPP1R32Q7Z5V6 425 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 SCUBE1Q8IWY4 988 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 DDIASQ8IXT1 998 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 PRSS58Q8IYP2 241 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 LRRC34Q8IZ02 419 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 GBP7Q8N8V2 638 aaPredicted RBP5.54□□□□□ -1.52
SSX3-201ENST00000298396 FAM47BQ8NA70 645 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 ZNF248Q8NDW4 579 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 RFWD2Q8NHY2 731 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 C16orf78Q8WTQ4 265 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 DYDC1Q8WWB3 177 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 KCNE4Q8WWG9 221 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 TSLPQ969D9 159 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 ANKRD9Q96BM1 317 aaPredicted RBP5.54□□□□□ -1.52
SSX3-201ENST00000298396 TM4SF18Q96CE8 201 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 THOC1Q96FV9 657 aaKnown RBP5.54□□□□□ -1.52
SSX3-201ENST00000298396 EGLN2Q96KS0 407 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 OR52B2Q96RD2 323 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 SERINC2Q96SA4 455 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 DPH2Q9BQC3 489 aaPredicted RBP5.54□□□□□ -1.52
SSX3-201ENST00000298396 EBF4Q9BQW3 602 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 C1orf50Q9BV19 199 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 NPLQ9BXD5 320 aaPredicted RBP5.54□□□□□ -1.52
SSX3-201ENST00000298396 SLC7A5P2Q9GIP4 190 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 WDR55Q9H6Y2 383 aaPredicted RBP5.54□□□□□ -1.52
SSX3-201ENST00000298396 WDR54Q9H977 334 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 LRTM1Q9HBL6 345 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 LYRM4Q9HD34 91 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 MKKSQ9NPJ1 570 aaPredicted RBP5.54□□□□□ -1.52
SSX3-201ENST00000298396 NECTIN3Q9NQS3 549 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 FGFR1OP2Q9NVK5 253 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 C1orf109Q9NX04 203 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 C5AR2Q9P296 337 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 IFT80Q9P2H3 777 aaPredicted RBP5.54□□□□□ -1.52
SSX3-201ENST00000298396 STOML1Q9UBI4 398 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 TRPC4Q9UBN4 977 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 MCM8Q9UJA3 840 aa5.54□□□□□ -1.52
SSX3-201ENST00000298396 FBXW2Q9UKT8 454 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms