RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 DUSP15Q9H1R2 295 aaPredicted RBP13.48□□□□□ -0.25
C9orf3-202ENST00000297979 SEMA6CQ9H3T2 930 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 FANCFQ9NPI8 374 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 ZSCAN32Q9NX65 697 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 SCOCQ9UIL1 159 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 ENTPD4Q9Y227 616 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 WASHC1A8K0Z3 465 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 NOBOXO60393 691 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 UBXN7O94888 489 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 ARAFP10398 606 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 NR2F6P10588 404 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 ZNF10P21506 573 aaPredicted RBP13.48□□□□□ -0.25
C9orf3-202ENST00000297979 GPC1P35052 558 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 CRYBA2P53672 197 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 C21orf59P57076 290 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 CDK6Q00534 326 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 EEF1A2Q05639 463 aaKnown RBP13.48□□□□□ -0.25
C9orf3-202ENST00000297979 SPIDRQ14159 915 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 WDR45BQ5MNZ6 344 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 VTCN1Q7Z7D3 282 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 IL1RAPQ9NPH3 570 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 PHF11Q9UIL8 331 aa13.48□□□□□ -0.25
C9orf3-202ENST00000297979 PAIP2BQ9ULR5 123 aaKnown RBP13.48□□□□□ -0.25
C9orf3-202ENST00000297979 ABCA7Q8IZY2 2146 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 GON4LQ3T8J9 2241 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 MYO1GB0I1T2 1018 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 LMO7DNF2Z398 122 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 DLGAP1O14490 977 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 SUV39H1O43463 412 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 EIF2S1P05198 315 aaKnown RBP13.47□□□□□ -0.25
C9orf3-202ENST00000297979 HOXD12P35452 270 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 CCT3P49368 545 aaKnown RBP13.47□□□□□ -0.25
C9orf3-202ENST00000297979 CHN2P52757 468 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 SNRPNP63162 240 aaKnown RBP13.47□□□□□ -0.25
C9orf3-202ENST00000297979 CBX3Q13185 183 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 DEFB134Q4QY38 66 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 CYBRD1Q53TN4 286 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 UGT2A3Q6UWM9 527 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 CEACAM20Q6UY09 585 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 C6orf120Q7Z4R8 191 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 SLC30A8Q8IWU4 369 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 CHERPQ8IWX8 916 aaKnown RBP13.47□□□□□ -0.25
C9orf3-202ENST00000297979 SVOPLQ8N434 492 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 SDCCAG3Q96C92 435 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 CNRIP1Q96F85 164 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-202ENST00000297979 GIMAP4Q9NUV9 329 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 CES1P1Q9UKY3 287 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 ANGPT4Q9Y264 503 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 LILRA5A6NI73 299 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 BCAT2O15382 392 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-202ENST00000297979 B3GALT2O43825 422 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 ZNF254O75437 659 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 GCM2O75603 506 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-202ENST00000297979 INMTO95050 263 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 FABP3P05413 133 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 AFF3P51826 1226 aaKnown RBP13.47□□□□□ -0.25
C9orf3-202ENST00000297979 MANEAQ5SRI9 462 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 OTUD3Q5T2D3 398 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-202ENST00000297979 TBPL2Q6SJ96 375 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 ZDHHC13Q8IUH4 622 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 MAGEE2Q8TD90 523 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-202ENST00000297979 TPD52L3Q96J77 140 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 THEGQ9P2T0 379 aa13.47□□□□□ -0.25
C9orf3-202ENST00000297979 TP53BP1Q12888 1972 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-202ENST00000297979 G3V2T6 193 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 B4GALT2O60909 372 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 ST6GAL1P15907 406 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 CDH3P22223 829 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 BUD31P41223 144 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-202ENST00000297979 CAPZBP47756 277 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 RPS26P62854 115 aaKnown RBP13.46□□□□□ -0.25
C9orf3-202ENST00000297979 TXNL4AP83876 142 aaKnown RBP13.46□□□□□ -0.25
C9orf3-202ENST00000297979 TNFRSF17Q02223 184 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 ELOAQ14241 798 aaKnown RBP13.46□□□□□ -0.25
C9orf3-202ENST00000297979 DEFB133Q30KQ1 61 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 C17orf82Q86X59 251 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-202ENST00000297979 GRAMD2AQ8IUY3 354 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 ZC3H7AQ8IWR0 971 aaKnown RBP13.46□□□□□ -0.25
C9orf3-202ENST00000297979 CSNK1A1LQ8N752 337 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 HORMAD2Q8N7B1 307 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 KLHL6Q8WZ60 621 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 SLC38A3Q99624 504 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 PAPOLBQ9NRJ5 636 aaKnown RBP13.46□□□□□ -0.25
C9orf3-202ENST00000297979 SMPD3Q9NY59 655 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-202ENST00000297979 SDC3O75056 442 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 ALOX12P18054 663 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 CSNK2A2P19784 350 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-202ENST00000297979 ARSFP54793 590 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 TP53BP2Q13625 1128 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 DAG1Q14118 895 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 TNFAIP8L2Q6P589 184 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-202ENST00000297979 TMEM64Q6YI46 380 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 STK32CQ86UX6 486 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 CARM1Q86X55 608 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 C19orf47Q8N9M1 422 aaKnown RBP13.46□□□□□ -0.25
C9orf3-202ENST00000297979 SUN3Q8TAQ9 357 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 TFAP2CQ92754 450 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 CCDC3Q9BQI4 270 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 DOHHQ9BU89 302 aa13.46□□□□□ -0.25
C9orf3-202ENST00000297979 ADI1Q9BV57 179 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms