RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 M1APQ8TC57 530 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 COQ8BQ96D53 544 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 CCNL2Q96S94 520 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-201ENST00000297405 LGR6Q9HBX8 967 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 ZFP14Q9HCL3 533 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 COLEC10Q9Y6Z7 277 aa4.67□□□□□ -1.66
CSMD3-201ENST00000297405 SBF2Q86WG5 1849 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 LOC285095A0A1B0GVY8 99 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 C22orf31O95567 290 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 NCK1P16333 377 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 HMGCS2P54868 508 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ENDOGQ14249 297 aaKnown RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 XKR5Q6UX68 686 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 C6orf120Q7Z4R8 191 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 OR6V1Q8N148 313 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PXT1Q8NFP0 134 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 OR6S1Q8NH40 331 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 GATA6Q92908 595 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 WNT8BQ93098 351 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 COA7Q96BR5 231 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 RBMXL1Q96E39 390 aaKnown RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PHYHIPLQ96FC7 376 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CPB2Q96IY4 423 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SPATA33Q96N06 139 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 TOLLIPQ9H0E2 274 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 GBA3Q9H227 469 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 C11orf49Q9H6J7 331 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ABCB8Q9NUT2 735 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PARPBPQ9NWS1 579 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 DIP2AQ14689 1571 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 NCF1BA6NI72 391 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 NCF1CA8MVU1 366 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CLDN4O14493 209 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 LARGE1O95461 756 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 C1QBP02746 253 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 HSD17B1P14061 328 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CPEP16870 476 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 S100A11P31949 105 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 IDH3AP50213 366 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 OR10A3P58181 314 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 EPGNQ6UW88 154 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ABHD13Q7L211 337 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 TREML1Q86YW5 311 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF454Q8N9F8 522 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 RHOXF1Q8NHV9 184 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 NKX6-2Q9C056 277 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 DUS2Q9NX74 493 aaKnown RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SRPK3Q9UPE1 567 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 MED31Q9Y3C7 131 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 OR10H1Q9Y4A9 318 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 hCG_1818297A0A087WSY0 165 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SLC7A4O43246 635 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 DEDDO75618 318 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 TOXO94900 526 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 HTR1AP08908 422 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CPN1P15169 458 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 UGT2B7P16662 529 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 IL1R2P27930 398 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 MIPP30301 263 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PTGER3P43115 390 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CHIT1Q13231 466 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 TBCEQ15813 527 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 HAGHQ16775 308 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 TEX261Q6UWH6 196 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF366Q8N895 744 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ZFAND1Q8TCF1 268 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ARNTL2Q8WYA1 636 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 RBCK1Q9BYM8 510 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.66□□□□□ -1.66
CSMD3-201ENST00000297405 KCNQ5Q9NR82 932 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ABRACLQ9P1F3 81 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 U3KQ87 197 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 FAAHO00519 579 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ARPC5O15511 151 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SOX15O60248 233 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SLC43A1O75387 559 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SLC22A5O76082 557 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ZP3P21754 424 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 HTR1EP28566 365 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 TCP10Q12799 353 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 GPR176Q14439 515 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CHRFAM7AQ494W8 412 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 FAM183BPQ6ZVS7 135 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CHST9Q7L1S5 443 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ACBD7Q8N6N7 88 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ADAMTS14Q8WXS8 1223 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF75AQ96N20 296 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SLC5A7Q9GZV3 580 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PPM1HQ9ULR3 514 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 DEPDC5O75140 1603 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 IQSEC2Q5JU85 1478 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 PCDH7O60245 1069 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SH3BGRLO75368 114 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CDK14O94921 469 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SLC25A27O95847 323 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 RFX3P48380 749 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 CPT1AP50416 773 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 GPR85P60893 370 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 SLC2A7Q6PXP3 512 aa4.66□□□□□ -1.66
CSMD3-201ENST00000297405 VASH1Q7L8A9 365 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms