RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 RNF13O43567 381 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 CLIC3O95833 236 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 PLGLB1Q02325 96 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 NSMAFQ92636 917 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 CPEB1Q9BZB8 566 aaKnown RBP12.24□□□□□ -0.45
PTCD1-201ENST00000292478 ERVK-18Q9QC07 812 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF69Q9UC07 566 aa12.24□□□□□ -0.45
PTCD1-201ENST00000292478 IGLON5A6NGN9 336 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 RPS17P08708 135 aaKnown RBP12.23□□□□□ -0.45
PTCD1-201ENST00000292478 ADRB3P13945 408 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 NTSR1P30989 418 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 RPS3AP61247 264 aaKnown RBP12.23□□□□□ -0.45
PTCD1-201ENST00000292478 ACTA2P62736 377 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 ACTG2P63267 376 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 AAK1Q2M2I8 961 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 ARHGAP11AQ6P4F7 1023 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 UBE2Q1Q7Z7E8 422 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 CHERPQ8IWX8 916 aaKnown RBP12.23□□□□□ -0.45
PTCD1-201ENST00000292478 ARFGAP1Q8N6T3 406 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 OR51G2Q8NGK0 314 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 FUZQ9BT04 418 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 TREX1Q9NSU2 369 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 ZDHHC7Q9NXF8 308 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 SCP2D1Q9UJQ7 156 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 HNRNPA0Q13151 305 aaKnown RBP12.23□□□□□ -0.45
PTCD1-201ENST00000292478 IQCF2Q8IXL9 164 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 OR8H3Q8N146 312 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 SLC37A3Q8NCC5 494 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 STOX2Q9P2F5 926 aaPredicted RBP12.23□□□□□ -0.45
PTCD1-201ENST00000292478 TEX13CA0A0J9YWL9 993 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 HTR3EA5X5Y0 456 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 GALNT12Q8IXK2 581 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 HS3ST5Q8IZT8 346 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 CSNK1A1LQ8N752 337 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 THAP4Q8WY91 577 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 GAL3ST1Q99999 423 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 USP3Q9Y6I4 520 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 PMS2P3Q13401 168 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 XKR5Q6UX68 686 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 CENPSQ8N2Z9 138 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 THAP6Q8TBB0 222 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 TRMT2BQ96GJ1 504 aaKnown RBP12.23□□□□□ -0.45
PTCD1-201ENST00000292478 CDCA3Q99618 268 aaPredicted RBP12.23□□□□□ -0.45
PTCD1-201ENST00000292478 KLF16Q9BXK1 252 aaPredicted RBP12.23□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF717Q9BY31 904 aaPredicted RBP12.23□□□□□ -0.45
PTCD1-201ENST00000292478 MTMR10Q9NXD2 777 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 DKKL1Q9UK85 242 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 SPO11Q9Y5K1 396 aa12.23□□□□□ -0.45
PTCD1-201ENST00000292478 IRS2Q9Y4H2 1338 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 SOCS2O14508 198 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 GPR37L1O60883 481 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 NDUFV2P19404 249 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 ERP29P30040 261 aaKnown RBP12.22□□□□□ -0.45
PTCD1-201ENST00000292478 VEZF1Q14119 521 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 SLC36A3Q495N2 470 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 FIP1L1Q6UN15 594 aaKnown RBP12.22□□□□□ -0.45
PTCD1-201ENST00000292478 LRRN1Q6UXK5 716 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 P4HA3Q7Z4N8 544 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 MFSD2AQ8NA29 543 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 ECHDC3Q96DC8 303 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 PTCHD1Q96NR3 888 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 HOXD1Q9GZZ0 328 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF304Q9HCX3 659 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 PAK1IP1Q9NWT1 392 aaPredicted RBP12.22□□□□□ -0.45
PTCD1-201ENST00000292478 ALKBH4Q9NXW9 302 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 HCN2Q9UL51 889 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 RGPD5Q99666 1765 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 A8MU76 341 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 NME4O00746 187 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 PHYHO14832 338 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 LILRB3O75022 631 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 MT-ND2P03891 347 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 S1PR1P21453 382 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 IL4RP24394 825 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 PHC1P78364 1004 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 RPL19P84098 196 aaKnown RBP12.22□□□□□ -0.45
PTCD1-201ENST00000292478 LCTLQ6UWM7 567 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 LOC285095A0A1B0GVY8 99 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 MEIS3P2A8K0S8 358 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF878C9JN71 531 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 L7N2F9 121 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 PRH1P02810 166 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 VAMP2P63027 116 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 ID2Q02363 134 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 RNF111Q6ZNA4 994 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 NEIL3Q8TAT5 605 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 SGTBQ96EQ0 304 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 BMFQ96LC9 184 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 HSPA12BQ96MM6 686 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 SMOXQ9NWM0 555 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 C14orf166Q9Y224 244 aaKnown RBP12.22□□□□□ -0.45
PTCD1-201ENST00000292478 ARNTLO00327 626 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 SOX1O00570 391 aaPredicted RBP12.22□□□□□ -0.45
PTCD1-201ENST00000292478 PGCP20142 388 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 PVALBP20472 110 aaPredicted RBP12.22□□□□□ -0.45
PTCD1-201ENST00000292478 MLLT1Q03111 559 aaPredicted RBP12.22□□□□□ -0.45
PTCD1-201ENST00000292478 HSD17B12Q53GQ0 312 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 SLC35F1Q5T1Q4 408 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 PYHIN1Q6K0P9 492 aa12.22□□□□□ -0.45
PTCD1-201ENST00000292478 KCNN1Q92952 543 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms