RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ZNF77Q15935 545 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 C6orf136Q5SQH8 315 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 FBXO42Q6P3S6 717 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 TNFAIP8L2Q6P589 184 aaPredicted RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 PAQR9Q6ZVX9 377 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 STOML3Q8TAV4 291 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 FRS2Q8WU20 508 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 NCSTNQ92542 709 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 GTF2H4Q92759 462 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 EDAQ92838 391 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 GLYATL1Q969I3 302 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 MED30Q96HR3 178 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 FCRL3Q96P31 734 aaPredicted RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 DPYSL5Q9BPU6 564 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF471Q9BX82 626 aaPredicted RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 SERTAD3Q9UJW9 196 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 RUVBL1Q9Y265 456 aaKnown RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF451Q9Y4E5 1061 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 RIIAD1A6NNX1 92 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 MAFKO60675 156 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 MITFO75030 526 aaPredicted RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 NUDT14O95848 222 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 PRPS1L1P21108 318 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 CPOXP36551 454 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 ETV3P41162 512 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 GPRC6AQ5T6X5 926 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 CARM1Q86X55 608 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 CHST4Q8NCG5 386 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 HSPA12BQ96MM6 686 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 MTERF1Q99551 399 aaKnown RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 CPEB1Q9BZB8 566 aaKnown RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 PTGDR2Q9Y5Y4 395 aa10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 DNMT3AQ9Y6K1 912 aaPredicted RBP10.89□□□□□ -0.67
NPC1L1-201ENST00000289547 HMX3A6NHT5 357 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 CLCA1A8K7I4 914 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 HOXC11O43248 304 aaPredicted RBP10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 EEF1E1O43324 174 aaKnown RBP10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 CDC40O60508 579 aaKnown RBP eCLIP10.88□□□□□ -0.673e-8■□□□□ 8
NPC1L1-201ENST00000289547 SMIM18P0DKX4 95 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF14P17017 642 aaPredicted RBP10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 GCAP28676 217 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 TAS2R50P59544 299 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 NPRL3Q12980 569 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 POU4F3Q15319 338 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 C9orf64Q5T6V5 341 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 KIAA0895LQ68EN5 471 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 C22orf42Q6IC83 251 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 MED27Q6P2C8 311 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF782Q6ZMW2 699 aaPredicted RBP10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 PRSS48Q7RTY5 328 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 GALNT7Q86SF2 657 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 ADGRG2Q8IZP9 1017 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 LILRA2Q8N149 483 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 FTMTQ8N4E7 242 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 ASB15Q8WXK1 588 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 FAM129BQ96TA1 746 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 NDC1Q9BTX1 674 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 GPN2Q9H9Y4 310 aaPredicted RBP10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 OLAHQ9NV23 265 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF282Q9UDV7 671 aaPredicted RBP10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 TRPS1Q9UHF7 1281 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 MYH15Q9Y2K3 1946 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 MYO9BQ13459 2157 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 CD247P20963 164 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 SHMT2P34897 504 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 CSNK1DP48730 415 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 PXNP49023 591 aaPredicted RBP10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 RBBP4Q09028 425 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 SLC36A3Q495N2 470 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 C2orf73Q8N5S3 287 aaPredicted RBP10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 SAMD12Q8N8I0 201 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 TFGQ92734 400 aaPredicted RBP10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 IER2Q9BTL4 223 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 CXCL16Q9H2A7 254 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 MEAF6Q9HAF1 191 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 ELL3Q9HB65 397 aaPredicted RBP10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 COPZ2Q9P299 210 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 OR10H1Q9Y4A9 318 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 TRBC2A0A5B9 178 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 B8ZZF3 427 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 MEN1O00255 615 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 SMAD9O15198 467 aaKnown RBP10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 PRAMEF12O95522 483 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 PCSK2P16519 638 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 ACADLP28330 430 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 HOXD9P28356 352 aaPredicted RBP10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 RAB5BP61020 215 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 EIF5AP63241 154 aaKnown RBP10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 EMX2Q04743 252 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 BCL7AQ4VC05 210 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 PLCZ1Q86YW0 608 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 FAM217AQ8IXS0 508 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 CADM3Q8N126 398 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 FAM110BQ8TC76 370 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 SMPDL3AQ92484 453 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 COQ10AQ96MF6 247 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 SORT1Q99523 831 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 GDF15Q99988 308 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 ARHGAP9Q9BRR9 750 aa10.88□□□□□ -0.67
NPC1L1-201ENST00000289547 ZBTB20Q9HC78 741 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms