RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CIB2O75838 187 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 CPSF4O95639 269 aaKnown RBP17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 C6orf47O95873 294 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 ONECUT2O95948 504 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 FHP07954 510 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 PTPN6P29350 595 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 NTSP30990 170 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 MAPK10P53779 464 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 HBA1P69905 142 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 DCDP81605 110 aaKnown RBP17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 RIPK1Q13546 671 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 MLC1Q15049 377 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 FBXW10Q5XX13 1052 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 ZNF385CQ66K41 422 aaPredicted RBP17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 TMPRSS12Q86WS5 348 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 MSRB3Q8IXL7 192 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 C10orf67Q8IYJ2 551 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 GOT1L1Q8NHS2 421 aaPredicted RBP17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 CCDC124Q96CT7 223 aaKnown RBP17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 TAAR9Q96RI9 348 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 BBS4Q96RK4 519 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 RBCK1Q9BYM8 510 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 ASPSCR1Q9BZE9 553 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 TRIM8Q9BZR9 551 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 SLC6A13Q9NSD5 602 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 SLC25A37Q9NYZ2 338 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 VAPAQ9P0L0 249 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 PISDQ9UG56 409 aa17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 CDV3Q9UKY7 258 aaKnown RBP17.79■□□□□ 0.44
PDLIM3-202ENST00000284770 A0A1W2PNU3 283 aaPredicted RBP17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 LDB3O75112 727 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 GPR75O95800 540 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 C8orf89P0DMQ9 161 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 ZNF28P17035 718 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 CSNK2A2P19784 350 aaPredicted RBP17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 ME2P23368 584 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 PPP2R1BP30154 601 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 MPIP34949 423 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 FEN1P39748 380 aaKnown RBP17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 CDKN2CP42773 168 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 XKP51811 444 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 FOLH1Q04609 750 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 ERV3-1Q14264 604 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 ZNF750Q32MQ0 723 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 NKAIN1Q4KMZ8 207 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 RABL3Q5HYI8 236 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 SAMD4BQ5PRF9 694 aaKnown RBP17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 OR4N5Q8IXE1 308 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 OR4A15Q8NGL6 344 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 WDR36Q8NI36 951 aaKnown RBP17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 OR5P2Q8WZ92 322 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 LRFN5Q96NI6 719 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 AMDHD1Q96NU7 426 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 DDA1Q9BW61 102 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 GLIPR2Q9H4G4 154 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 MKKSQ9NPJ1 570 aaPredicted RBP17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 SLC22A11Q9NSA0 550 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 TAS2R9Q9NYW1 312 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 PCDHB14Q9Y5E9 798 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 B3GALT1Q9Y5Z6 326 aa17.78■□□□□ 0.44
PDLIM3-202ENST00000284770 C15orf38-AP3S2A0A0A6YYH1 394 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 PMS2P1A4D2B8 440 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 FGF17O60258 216 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 B4GALT2O60909 372 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 CTNSO60931 367 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 ENTPD5O75356 428 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 BMP10O95393 424 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 ANP32DO95626 131 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 GSNP06396 782 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 ATXN8OSP0DMR3 200 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 ACTR3P61158 418 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 C1orf146Q5VVC0 180 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 DNAJC14Q6Y2X3 702 aaPredicted RBP17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 COX15Q7KZN9 410 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 ARPINQ7Z6K5 226 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 CCDC116Q8IYX3 515 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 SUN3Q8TAQ9 357 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 ANKRD9Q96BM1 317 aaPredicted RBP17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 ANKRD27Q96NW4 1050 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 PHF12Q96QT6 1004 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 ULBP3Q9BZM4 244 aa17.77■□□□□ 0.44
PDLIM3-202ENST00000284770 A0A1W2PS29 197 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 MEN1O00255 615 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 CDC123O75794 336 aaPredicted RBP17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 KCNK5O95279 499 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 ZCCHC18P0CG32 403 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 NCBP2P52298 156 aaKnown RBP eCLIP17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 HSD17B7P56937 341 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 TARDBPQ13148 414 aaKnown RBP eCLIP17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 ZNF621Q6ZSS3 439 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 ZNF551Q7Z340 670 aaPredicted RBP17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 FAM156AQ8NDB6 213 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 OR8J3Q8NGG0 315 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 ZFP28Q8NHY6 868 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 TGIF2Q9GZN2 237 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 NEUROD4Q9HD90 331 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 PRTFDC1Q9NRG1 225 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 LANCL2Q9NS86 450 aa17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 SUCOQ9UBS9 1254 aaKnown RBP17.76■□□□□ 0.43
PDLIM3-202ENST00000284770 ZNF282Q9UDV7 671 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms