RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 TATDN3Q17R31 274 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 LYPLAL1Q5VWZ2 237 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ANKRD54Q6NXT1 300 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 C19orf48Q6RUI8 117 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 GDPD4Q6W3E5 623 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 OR8H3Q8N146 312 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 WDR36Q8NI36 951 aaKnown RBP15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CHFRQ96EP1 664 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 NIPSNAP1Q9BPW8 284 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 NIPAL2Q9H841 368 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 IMPAD1Q9NX62 359 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 KCTD5Q9NXV2 234 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 KLHL21Q9UJP4 597 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PCDHGA2Q9Y5H1 932 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 KCNE2Q9Y6J6 123 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SDK1Q7Z5N4 2213 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ITPKAP23677 461 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 LTBRP36941 435 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SOX3P41225 446 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 RECQLP46063 649 aaPredicted RBP15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 DGKGP49619 791 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PSPHP78330 225 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 EIF4HQ15056 248 aaKnown RBP15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ZNF621Q6ZSS3 439 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 GLCCI1Q86VQ1 547 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CAMKK1Q8N5S9 505 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PANX1Q96RD7 426 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 LIN7BQ9HAP6 207 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PCDHGB3Q9Y5G1 929 aa15.2■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TMEM202A6NGA9 273 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 UPK3BL1B0FP48 263 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 UPK3BL2E5RIL1 263 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TNFRSF11BO00300 401 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 FGF19O95750 216 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ANXA5P08758 320 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 POU2F1P14859 743 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 EPORP19235 508 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TNNI3P19429 210 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TNFRSF1BP20333 461 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TALDO1P37837 337 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 KCNJ10P78508 379 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 MXD1Q05195 221 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ASAH1Q13510 395 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ZBTB37Q5TC79 503 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 XKRXQ6PP77 449 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 METTL3Q86U44 580 aaKnown RBP15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 DACT3Q96B18 629 aaPredicted RBP15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ASIC5Q9NY37 505 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 FPGTO14772 594 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 WDR47O94967 919 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CSF3P09919 207 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 NUDT7P0C024 238 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 OR56A5P0C7T3 313 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 RORCP51449 518 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 LILRA3Q8N6C8 439 aaPredicted RBP15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 OR10G2Q8NGC3 310 aa15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PCNPQ8WW12 178 aaKnown RBP15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 DNMT3AQ9Y6K1 912 aaPredicted RBP15.19■□□□□ 0.02
MAP1LC3B-201ENST00000268607 BTN3A3O00478 584 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PDYNP01213 254 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ALAS2P22557 587 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SSTR4P31391 388 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CRYBA2P53672 197 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TOR1AIP1Q5JTV8 583 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SLC35F1Q5T1Q4 408 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 KRT73Q86Y46 540 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 DENND6BQ8NEG7 585 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 OPALINQ96PE5 141 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 P2RY13Q9BPV8 354 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CPEB1Q9BZB8 566 aaKnown RBP15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ZNF224Q9NZL3 707 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SLC22A14Q9Y267 594 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CMAHPQ9Y471 501 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 NUMA1Q14980 2115 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 KIF26AQ9ULI4 1882 aaPredicted RBP15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 BET1O15155 118 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SLC22A5O76082 557 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CPSF4O95639 269 aaKnown RBP15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CTSLP07711 333 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 CKMT1AP12532 417 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ATP1B2P14415 290 aaPredicted RBP15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 AOAHP28039 575 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 HLA-DMAP28067 261 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 GDI1P31150 447 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 QPRTQ15274 297 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 GPR19Q15760 415 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ATAT1Q5SQI0 421 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TIGD3Q6B0B8 471 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 KIAA1324Q6UXG2 1013 aaKnown RBP15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TSEN54Q7Z6J9 526 aaKnown RBP15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SLC44A2Q8IWA5 706 aaPredicted RBP15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 PGBD3Q8N328 593 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 SPPL2AQ8TCT8 520 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 USP7Q93009 1102 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 MAL2Q969L2 176 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 RIOK2Q9BVS4 552 aaKnown RBP15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 TAPBPLQ9BX59 468 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ERVMER34-1Q9H9K5 563 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 HHATLQ9HCP6 504 aa15.18■□□□□ 0.02
MAP1LC3B-201ENST00000268607 ABCB9Q9NP78 766 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms