RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 TRIB3Q96RU7 358 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 PDCD10Q9BUL8 212 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 GON7Q9BXV9 100 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 PPIL3Q9H2H8 161 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 ZDHHC4Q9NPG8 344 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 TBC1D3DA0A087WVF3 549 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 TBC1D3IA0A087WXS9 549 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 TBC1D3EA0A087X179 549 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 TBC1D3KA0A087X1G2 549 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 TBC1D3FA6NER0 549 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 TBC1D3LB9A6J9 549 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 TBC1D3HP0C7X1 549 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 SGSHP51688 502 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 NFATC2Q13469 925 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 ELAVL3Q14576 367 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 CTU2Q2VPK5 515 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 TBC1D3GQ6DHY5 549 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 TBC1D3CQ6IPX1 549 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 ZNF613Q6PF04 617 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 THOC6Q86W42 341 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 PIANPQ8IYJ0 282 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 TBC1D3Q8IZP1 549 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 SIMC1Q8NDZ2 872 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 OR2T11Q8NH01 316 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 NEIL3Q8TAT5 605 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 TNFAIP8L1Q8WVP5 186 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 RAD51AP1Q96B01 352 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 LINC00597Q9H2U6 94 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 LTB4R2Q9NPC1 389 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 INIPQ9NRY2 104 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 MARK1Q9P0L2 795 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 SLCO3A1Q9UIG8 710 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 MAB21L2Q9Y586 359 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 DAPL1A0PJW8 107 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 METTL15A6NJ78 407 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 CHURC1-FNTBB4DL54 471 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 ENTPD6O75354 484 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 REM1O75628 298 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 CR2P20023 1033 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 IRS1P35568 1242 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 RGRP47804 291 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 CDH11P55287 796 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 PITPNAQ00169 270 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 RBBP4Q09028 425 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 SLBPQ14493 270 aaKnown RBP eCLIP11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 SHHQ15465 462 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 ZNF77Q15935 545 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 B3GNT7Q8NFL0 401 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 HCAR2Q8TDS4 363 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 MRPL38Q96DV4 380 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 TBX5Q99593 518 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 AIF1LQ9BQI0 150 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 ABCG5Q9H222 651 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 RANBP3Q9H6Z4 567 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 M0R129 80 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 EIF3FO00303 357 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 MUSKO15146 869 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 PEX11BO96011 259 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 GSTM3P21266 225 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 DAPP51397 102 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 PPP2R2BQ00005 443 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 GINS1Q14691 196 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 MEDAGQ5VYS4 303 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 REEP3Q6NUK4 255 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 SMARCD3Q6STE5 483 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 BTLAQ7Z6A9 289 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 KLHDC8BQ8IXV7 354 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 CCDC36Q8IYA8 594 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 PIAS4Q8N2W9 510 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 C3orf14Q9HBI5 128 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 RANGRFQ9HD47 186 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 AKIP1Q9NQ31 210 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 PHPT1Q9NRX4 125 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 GRXCR1A8MXD5 290 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 M0R233 179 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 OR7A10O76100 309 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 SAGP10523 405 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 HLA-FP30511 346 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 NDUFA9Q16795 377 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 C1QTNF12Q5T7M4 302 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 ARL9Q6T311 187 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 CHMP1BQ7LBR1 199 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 CFAP206Q8IYR0 622 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 NRSN1Q8IZ57 195 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 TMEM151AQ8N4L1 468 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 OR9Q2Q8NGE9 314 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 GGHQ92820 318 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 FGF13Q92913 245 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 ZBED6CLQ96FA7 236 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 SLC35G5Q96KT7 338 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 NELL2Q99435 816 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 DOK1Q99704 481 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 EFCAB11Q9BUY7 163 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 SPATA9Q9BWV2 254 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 FOLH1BQ9HBA9 442 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 BEX1Q9HBH7 125 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 ZCCHC3Q9NUD5 404 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 COQ3Q9NZJ6 369 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 N6AMT1Q9Y5N5 214 aa11.01□□□□□ -0.65
CLSTN3-201ENST00000266546 PDCD11Q14690 1871 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms