RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 LIM2P55344 173 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 RAB38P57729 211 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 RPL38P63173 70 aaKnown RBP10.88□□□□□ -0.67
PFDN1-201ENST00000261813 HMGCS1Q01581 520 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 SSPNQ14714 243 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 KIAA0040Q15053 153 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 RFTN2Q52LD8 501 aaPredicted RBP10.88□□□□□ -0.67
PFDN1-201ENST00000261813 IL23RQ5VWK5 629 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 PPP1R32Q7Z5V6 425 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 METTL4Q8N3J2 472 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 GLB1L3Q8NCI6 653 aaPredicted RBP10.88□□□□□ -0.67
PFDN1-201ENST00000261813 TMEM52Q8NDY8 209 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 TSPEARQ8WU66 669 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 CHTF18Q8WVB6 975 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 TBC1D20Q96BZ9 403 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 FCRL1Q96LA6 429 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 CATSPER2Q96P56 530 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 OR1F2PQ96R84 312 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 CSF3RQ99062 836 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 ZBTB18Q99592 522 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 MAPKAP1Q9BPZ7 522 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 BRINP2Q9C0B6 783 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 VN1R1Q9GZP7 353 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 DDX31Q9H8H2 851 aaKnown RBP10.88□□□□□ -0.67
PFDN1-201ENST00000261813 SDR39U1Q9NRG7 319 aaPredicted RBP10.88□□□□□ -0.67
PFDN1-201ENST00000261813 AIG1Q9NVV5 245 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 KCMF1Q9P0J7 381 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 C3orf18Q9UK00 162 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 PTGDR2Q9Y5Y4 395 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 HS3ST3B1Q9Y662 390 aa10.88□□□□□ -0.67
PFDN1-201ENST00000261813 SEC16AO15027 2179 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 KALRNO60229 2985 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 A0A0A6YYD5 115 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 SOCS6O14544 535 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 CDC123O75794 336 aaPredicted RBP10.87□□□□□ -0.67
PFDN1-201ENST00000261813 IL2RAP01589 272 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 GBAP04062 536 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 HEXBP07686 556 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 IL10P22301 178 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 MMP11P24347 488 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 TPP2P29144 1249 aaPredicted RBP10.87□□□□□ -0.67
PFDN1-201ENST00000261813 RPL3P39023 403 aaKnown RBP10.87□□□□□ -0.67
PFDN1-201ENST00000261813 HNRNPFP52597 415 aaKnown RBP10.87□□□□□ -0.67
PFDN1-201ENST00000261813 CLNS1AP54105 237 aaKnown RBP10.87□□□□□ -0.67
PFDN1-201ENST00000261813 EMP2P54851 167 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 RHAGQ02094 409 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 STX5Q13190 355 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 SLAMF1Q13291 335 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 MINDY4Q4G0A6 757 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 OXLD1Q5BKU9 147 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 MRM1Q6IN84 353 aaKnown RBP10.87□□□□□ -0.67
PFDN1-201ENST00000261813 NOXRED1Q6NXP6 359 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 MED25Q71SY5 747 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 GPR155Q7Z3F1 870 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 MRGPREQ86SM8 312 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 NUDT13Q86X67 352 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 RAB43Q86YS6 212 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 ZCCHC7Q8N3Z6 543 aaKnown RBP10.87□□□□□ -0.67
PFDN1-201ENST00000261813 FAM47BQ8NA70 645 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 RP9Q8TA86 221 aaKnown RBP10.87□□□□□ -0.67
PFDN1-201ENST00000261813 NSL1Q96IY1 281 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 PRPF18Q99633 342 aaKnown RBP10.87□□□□□ -0.67
PFDN1-201ENST00000261813 CCDC106Q9BWC9 280 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 ZNF385DQ9H6B1 395 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 LYRM4Q9HD34 91 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 SEMA3GQ9NS98 782 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 MCM8Q9UJA3 840 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 MKL2Q9ULH7 1088 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 GPR45Q9Y5Y3 372 aa10.87□□□□□ -0.67
PFDN1-201ENST00000261813 COPG1Q9Y678 874 aaKnown RBP10.87□□□□□ -0.67
PFDN1-201ENST00000261813 CAPN14A8MX76 684 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 CYR61O00622 381 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 B4GALT2O60909 372 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 ALOX12BO75342 701 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 SLC22A3O75751 556 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 C1QL1O75973 258 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 IGHEP01854 428 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 KLK1P06870 262 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 ESRRAP11474 423 aaPredicted RBP10.86□□□□□ -0.67
PFDN1-201ENST00000261813 PLA2G2AP14555 144 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 PRPS1L1P21108 318 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 CALB2P22676 271 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 JAK1P23458 1154 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 TIA1P31483 386 aaKnown RBP eCLIP10.86□□□□□ -0.67
PFDN1-201ENST00000261813 HNRNPH2P55795 449 aaKnown RBP10.86□□□□□ -0.67
PFDN1-201ENST00000261813 TRA2BP62995 288 aaKnown RBP10.86□□□□□ -0.67
PFDN1-201ENST00000261813 BTG2P78543 158 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 KLF10Q13118 480 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 ATP1A4Q13733 1029 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 DPY19L1Q2PZI1 675 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 DEFB109BQ30KR1 87 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 MFSD4BQ5TF39 518 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 TMEM198Q66K66 360 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 FAAH2Q6GMR7 532 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 TMEM205Q6UW68 189 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 ZNF771Q7L3S4 317 aaPredicted RBP10.86□□□□□ -0.67
PFDN1-201ENST00000261813 COMMD6Q7Z4G1 85 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 C1orf52Q8N6N3 182 aaKnown RBP10.86□□□□□ -0.67
PFDN1-201ENST00000261813 NATD1Q8N6N6 113 aa10.86□□□□□ -0.67
PFDN1-201ENST00000261813 PLPP5Q8NEB5 264 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms