RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 KDM1BQ8NB78 822 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 ZNF548Q8NEK5 533 aaPredicted RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 OR5T2Q8NGG2 359 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 AKAP1Q92667 903 aaKnown RBP eCLIP3.86□□□□□ -1.79
RNF38-201ENST00000259605 TANKQ92844 425 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 SLC35C1Q96A29 364 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 C3orf49Q96BT1 292 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 PEX11GQ96HA9 241 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 NDNQ99608 321 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 TMEM45AQ9NWC5 275 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 TOR4AQ9NXH8 423 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 KCNIP3Q9Y2W7 256 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 NOSIPQ9Y314 301 aaKnown RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 MMACHCQ9Y4U1 282 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 CFAP20Q9Y6A4 193 aaKnown RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 FAM25EA8MYX2 175 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 ZNF587BE7ETH6 402 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 CCNE2O96020 404 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 PECAM1P16284 738 aaPredicted RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 TPSB2P20231 275 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 STOMP27105 288 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 MAOBP27338 520 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 KCNQ1P51787 676 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 ATP1B3P54709 279 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 NFATC3Q12968 1075 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 MAMLD1Q13495 774 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 DNASE1L3Q13609 305 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 OR8B8Q15620 311 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 TPSAB1Q15661 275 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 PLEKHN1Q494U1 663 aaPredicted RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 FAM78AQ5JUQ0 283 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 LIPMQ5VYY2 423 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 KLHDC10Q6PID8 442 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 HACD2Q6Y1H2 254 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 SPNS3Q6ZMD2 512 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 CCNI2Q6ZMN8 369 aaPredicted RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 PLEKHG7Q6ZR37 379 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 RPS19BP1Q86WX3 136 aaKnown RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 CCDC103Q8IW40 242 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 ZZZ3Q8IYH5 903 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 MMP21Q8N119 569 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 GALNT4Q8N4A0 578 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 BPIFB2Q8N4F0 458 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 FADS6Q8N9I5 356 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 WDSUB1Q8N9V3 476 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 DDHD1Q8NEL9 900 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 OR8K3Q8NH51 312 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 GRHL3Q8TE85 626 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 TSPEARQ8WU66 669 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 H1FXQ92522 213 aaKnown RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 CNOT9Q92600 299 aaKnown RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 RAB1CQ92928 201 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 ZNF689Q96CS4 500 aaPredicted RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 HRASLS5Q96KN8 279 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 ZNF578Q96N58 590 aaPredicted RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 TSGA13Q96PP4 275 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 FCRL5Q96RD9 977 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 PITX2Q99697 317 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 CPPED1Q9BRF8 314 aaPredicted RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 KATNB1Q9BVA0 655 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 RBM24Q9BX46 236 aaKnown RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 NUAK2Q9H093 628 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 MAGEE1Q9HCI5 957 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 ZNF334Q9HCZ1 680 aaPredicted RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 TAGLN3Q9UI15 199 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 ANKRD33BA6NCL7 494 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 LINC01387J3KSC0 135 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 TNFRSF10CO14798 259 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 GOT2P00505 430 aaKnown RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 LCATP04180 440 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 GSTP1P09211 210 aaKnown RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 ADORA3P0DMS8 318 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 G6PDP11413 515 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 CPT2P23786 658 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 LEPRP48357 1165 aaKnown RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 STARP49675 285 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 SLC7A9P82251 487 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 FMO1Q01740 532 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 ZNF844Q08AG5 666 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 PLA2G7Q13093 441 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 VEZF1Q14119 521 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 TRAM2Q15035 370 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 DEFB134Q4QY38 66 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 LIN52Q52LA3 116 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 DDI2Q5TDH0 399 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 ZNF598Q86UK7 904 aaKnown RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 MKXQ8IYA7 352 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 AMER2Q8N7J2 671 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 ZNF417Q8TAU3 575 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 RRNAD1Q96FB5 475 aaKnown RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 BSCL2Q96G97 398 aaPredicted RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 ALPK1Q96QP1 1244 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 ZNF587Q96SQ5 575 aaPredicted RBP3.86□□□□□ -1.79
RNF38-201ENST00000259605 MBOAT4Q96T53 435 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 CDRT15Q96T59 188 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 TMEM246Q9BRR3 403 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 RHNO1Q9BSD3 238 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 ISCUQ9H1K1 167 aa3.86□□□□□ -1.79
RNF38-201ENST00000259605 P2RY12Q9H244 342 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms