RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 A0A1B0GV50 99 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 OR2AG2A6NM03 316 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 HAS3O00219 553 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 EEDO75530 441 aaKnown RBP12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 AHSA1O95433 338 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 GLUD1P00367 558 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 ETV4P43268 484 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 NRLP54845 237 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 RAB8AP61006 207 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 SMAD3P84022 425 aaKnown RBP12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 ZNF169Q14929 603 aaPredicted RBP12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 ABRAXAS2Q15018 415 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 SLC36A3Q495N2 470 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 C9orf57Q5W0N0 161 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 CDHR3Q6ZTQ4 885 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 TAAR8Q969N4 342 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 MOAP1Q96BY2 351 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 OTUB2Q96DC9 234 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 LRR1Q96L50 414 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 ADAM7Q9H2U9 754 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 ADAP2Q9NPF8 381 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 GIMAP2Q9UG22 337 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 SCML2Q9UQR0 700 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 PCDHGC4Q9Y5F7 938 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 COL1A2P08123 1366 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 A8MVJ9 347 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 MSI1O43347 362 aaKnown RBP12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 ERCC1P07992 297 aaPredicted RBP12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 MAPK14Q16539 360 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 BCL2A1Q16548 175 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 GRAMD2AQ8IUY3 354 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 TXNDC5Q8NBS9 432 aaKnown RBP12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 SLC39A13Q96H72 371 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 FTHL17Q9BXU8 183 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 IFT22Q9H7X7 185 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 SIAEQ9HAT2 523 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 RHCGQ9UBD6 479 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 OR4D2P58180 307 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 MS4A2Q01362 244 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 MFSD13AQ14CX5 517 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 SLC8B1Q6J4K2 584 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 SLC39A4Q6P5W5 647 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 PXKQ7Z7A4 578 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 KLBQ86Z14 1044 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 C1orf127Q8N9H9 656 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 BOLLQ8N9W6 283 aaKnown RBP12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 OR2T33Q8NG76 320 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 DCUN1D4Q92564 292 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 ACDQ96AP0 544 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 CMTM7Q96FZ5 175 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 ARPC5LQ9BPX5 153 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 SAMD10Q9BYL1 202 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 DERL2Q9GZP9 239 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 RETREG1Q9H6L5 497 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 SLC27A5Q9Y2P5 690 aa12.63□□□□□ -0.39
PCDHGA3-201ENST00000253812 NIPSNAP2O75323 286 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 AMY2AP04746 511 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 S100A8P05109 93 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 HCKP08631 526 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 JUPP14923 745 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 HTR1BP28222 390 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 TNFSF8P32971 234 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 NUDT1P36639 197 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 LSSP48449 732 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 CHRFAM7AQ494W8 412 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 DPY19L2P1Q6NXN4 242 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 ZNF550Q7Z398 422 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 CACUL1Q86Y37 369 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 C2orf73Q8N5S3 287 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 SUMF2Q8NBJ7 301 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 OR56A3Q8NH54 315 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 ACOT11Q8WXI4 607 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 DEFB118Q96PH6 123 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 FEVQ99581 238 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 YIPF4Q9BSR8 244 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 THAP7Q9BT49 309 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 PDZD7Q9H5P4 517 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 MEAF6Q9HAF1 191 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 ACSL6Q9UKU0 697 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 LOC285095A0A1B0GVY8 99 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 MITFO75030 526 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 FUCA1P04066 466 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 POLR2CP19387 275 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 CDK2P24941 298 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 IL1R2P27930 398 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 GNRHRP30968 328 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 OR1E2P47887 323 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 DUSP4Q13115 394 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 OPCMLQ14982 345 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 FAM205BPQ63HN1 556 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 BLOC1S3Q6QNY0 202 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 SHISA4Q96DD7 197 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 FCRL1Q96LA6 429 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 CTRCQ99895 268 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 ACBD6Q9BR61 282 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 DNTTIP1Q9H147 329 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 APMAPQ9HDC9 416 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 OR6C2Q9NZP2 312 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 E7ESA3 106 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms