RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ARHGAP40Q5TG30 622 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 HES3Q5TGS1 186 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 TMEM164Q5U3C3 297 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 ZNF385CQ66K41 422 aaPredicted RBP12.17□□□□□ -0.46
LSM8-201ENST00000249299 DHRS13Q6UX07 377 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 QSOX2Q6ZRP7 698 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 SLCO6A1Q86UG4 719 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 DEFB107AQ8IZN7 70 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 LRRC25Q8N386 305 aaPredicted RBP12.17□□□□□ -0.46
LSM8-201ENST00000249299 GALNT15Q8N3T1 639 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 OR5T3Q8NGG3 340 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 COL26A1Q96A83 441 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 MCUR1Q96AQ8 359 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 CNRIP1Q96F85 164 aaPredicted RBP12.17□□□□□ -0.46
LSM8-201ENST00000249299 ZNF578Q96N58 590 aaPredicted RBP12.17□□□□□ -0.46
LSM8-201ENST00000249299 AMDHD1Q96NU7 426 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 SPATA9Q9BWV2 254 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 CADM1Q9BY67 442 aaKnown RBP12.17□□□□□ -0.46
LSM8-201ENST00000249299 RAD21L1Q9H4I0 556 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 NTMQ9P121 344 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 NDOR1Q9UHB4 597 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 PCDHGA8Q9Y5G5 932 aa12.17□□□□□ -0.46
LSM8-201ENST00000249299 PCNX2A6NKB5 2137 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 EVPLLA8MZ36 301 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 GFRA3O60609 400 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 KRT75O95678 551 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 JMJD7P0C870 316 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 CCL4P13236 92 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 CPMP14384 443 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 UQCRC2P22695 453 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 PGM1P36871 562 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 XCR1P46094 333 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 XKP51811 444 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 EEFSECP57772 596 aaKnown RBP12.16□□□□□ -0.46
LSM8-201ENST00000249299 HBA1P69905 142 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 SIM1P81133 766 aaPredicted RBP12.16□□□□□ -0.46
LSM8-201ENST00000249299 MAP7Q14244 749 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 RUNDC3AQ59EK9 446 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 ANKRD26P1Q6NSI1 321 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 NANOGP8Q6NSW7 305 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 PGM2L1Q6PCE3 622 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 IGF2-ASQ6U949 168 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 ZNF517Q6ZMY9 492 aaPredicted RBP12.16□□□□□ -0.46
LSM8-201ENST00000249299 BNC2Q6ZN30 1099 aaPredicted RBP12.16□□□□□ -0.46
LSM8-201ENST00000249299 OVCH1Q7RTY7 1134 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 SCUBE1Q8IWY4 988 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 MMP21Q8N119 569 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 PLPP5Q8NEB5 264 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 OR4A15Q8NGL6 344 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 FBXO27Q8NI29 283 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 SFXN5Q8TD22 340 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 ZNF675Q8TD23 568 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 ADAMTS14Q8WXS8 1223 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 EXOSC8Q96B26 276 aaKnown RBP12.16□□□□□ -0.46
LSM8-201ENST00000249299 MIEF2Q96C03 454 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 CLIP3Q96DZ5 547 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 SLC45A3Q96JT2 553 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 CSF3RQ99062 836 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 GLIPR2Q9H4G4 154 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 WDR54Q9H977 334 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 NANOGQ9H9S0 305 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 PRTFDC1Q9NRG1 225 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 VAPAQ9P0L0 249 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 HCN3Q9P1Z3 774 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 DHCR7Q9UBM7 475 aaKnown RBP12.16□□□□□ -0.46
LSM8-201ENST00000249299 TRPC4Q9UBN4 977 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 TMEM184BQ9Y519 407 aaPredicted RBP12.16□□□□□ -0.46
LSM8-201ENST00000249299 PCDHB14Q9Y5E9 798 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 FAM186AA6NE01 2351 aa12.16□□□□□ -0.46
LSM8-201ENST00000249299 A0A087WV62 115 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 MEN1O00255 615 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 DNAJB6O75190 326 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 ERAL1O75616 437 aaKnown RBP12.15□□□□□ -0.46
LSM8-201ENST00000249299 C6orf47O95873 294 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 HSD17B1P14061 328 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 CD82P27701 267 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 NCBP2P52298 156 aaKnown RBP eCLIP12.15□□□□□ -0.469e-10■■■□□ 18.8
LSM8-201ENST00000249299 OLR1P78380 273 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 FOLH1Q04609 750 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 OCA2Q04671 838 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 FADDQ13158 208 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 PIGGQ5H8A4 983 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 RIPOR1Q6ZS17 1223 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 ZNF621Q6ZSS3 439 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 SLC15A3Q8IY34 581 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 ST13P4Q8IZP2 240 aaPredicted RBP12.15□□□□□ -0.46
LSM8-201ENST00000249299 FBXW8Q8N3Y1 598 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 TNIP2Q8NFZ5 429 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 SUN3Q8TAQ9 357 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 NUDT8Q8WV74 236 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 POP5Q969H6 163 aaKnown RBP12.15□□□□□ -0.46
LSM8-201ENST00000249299 CIDECQ96AQ7 238 aaPredicted RBP12.15□□□□□ -0.46
LSM8-201ENST00000249299 ANKRD9Q96BM1 317 aaPredicted RBP12.15□□□□□ -0.46
LSM8-201ENST00000249299 PEX11GQ96HA9 241 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 CDRT15Q96T59 188 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 INPP5KQ9BT40 448 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 THTPAQ9BU02 230 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 MUC13Q9H3R2 512 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 C3orf14Q9HBI5 128 aa12.15□□□□□ -0.46
LSM8-201ENST00000249299 APMAPQ9HDC9 416 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms