RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CLK1P49759 484 aaKnown RBP18.52■□□□□ 0.56
CDC42EP1-201ENST00000249014 CDC42P60953 191 aa18.52■□□□□ 0.56
CDC42EP1-201ENST00000249014 PRDX1Q06830 199 aaKnown RBP18.52■□□□□ 0.56
CDC42EP1-201ENST00000249014 ZNF793Q6ZN11 406 aa18.52■□□□□ 0.56
CDC42EP1-201ENST00000249014 SLC46A3Q7Z3Q1 461 aa18.52■□□□□ 0.56
CDC42EP1-201ENST00000249014 HDDC3Q8N4P3 179 aa18.52■□□□□ 0.56
CDC42EP1-201ENST00000249014 COL21A1Q96P44 957 aa18.52■□□□□ 0.56
CDC42EP1-201ENST00000249014 MACROD1Q9BQ69 325 aa18.52■□□□□ 0.56
CDC42EP1-201ENST00000249014 DPH7Q9BTV6 452 aa18.52■□□□□ 0.56
CDC42EP1-201ENST00000249014 SFXN1Q9H9B4 322 aa18.52■□□□□ 0.56
CDC42EP1-201ENST00000249014 TRPV4Q9HBA0 871 aa18.52■□□□□ 0.56
CDC42EP1-201ENST00000249014 IMP3Q9NV31 184 aaKnown RBP18.52■□□□□ 0.56
CDC42EP1-201ENST00000249014 OBP2AQ9NY56 170 aa18.52■□□□□ 0.56
CDC42EP1-201ENST00000249014 GOLGA4Q13439 2230 aaKnown RBP18.52■□□□□ 0.55
CDC42EP1-201ENST00000249014 BOLA2-SMG1P6H3BVE0 249 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 POU1F1P28069 291 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 IRF3Q14653 427 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 SYPL1Q16563 259 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 PERM1Q5SV97 790 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 OR5D16Q8NGK9 328 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 PSMA8Q8TAA3 256 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 VANGL1Q8TAA9 524 aaPredicted RBP18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 CAMK1GQ96NX5 476 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 KLHL31Q9H511 634 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 GDE1Q9NZC3 331 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 ADAM29Q9UKF5 820 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 DOCK8Q8NF50 2099 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 LRIT2A6NDA9 550 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 OR12D1P0DN82 309 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 HOXB3P14651 431 aaPredicted RBP18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 ELAVL4P26378 380 aaKnown RBP18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 KCNJ5P48544 419 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 DMPKQ09013 629 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 AGERQ15109 404 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 NDUFAF5Q5TEU4 345 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 COMTD1Q86VU5 262 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 LACC1Q8IV20 430 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 ZNF764Q96H86 408 aaPredicted RBP18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 TREX2Q9BQ50 279 aaPredicted RBP18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 GLIPR2Q9H4G4 154 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 ACSS1Q9NUB1 689 aaPredicted RBP18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 REV1Q9UBZ9 1251 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 DAPK2Q9UIK4 370 aa18.51■□□□□ 0.55
CDC42EP1-201ENST00000249014 C4orf51C9J302 202 aa18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 IGFBP1P08833 259 aaPredicted RBP18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 PTGER1P34995 402 aa18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 RAB28P51157 221 aa18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 BCAP31P51572 246 aa18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 OXA1LQ15070 435 aa18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 DUSP6Q16828 381 aa18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 SOWAHCQ53LP3 525 aaPredicted RBP18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 DEF8Q6ZN54 512 aa18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 PTCHD4Q6ZW05 846 aa18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 OLIG3Q7RTU3 272 aa18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 SZRD1Q7Z422 152 aa18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 ZNF354BQ96LW1 612 aa18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 MROQ9BYG7 248 aa18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 ENOPH1Q9UHY7 261 aa18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.5■□□□□ 0.55
CDC42EP1-201ENST00000249014 PRR23AA6NEV1 266 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 GLOD5A6NK44 160 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 SLC28A2O43868 658 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 CLEC3AO75596 197 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 PDE9AO76083 593 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 UGT2B10P36537 528 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 SSR2P43308 183 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 NIPAL1Q6NVV3 410 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 DHRS1Q96LJ7 313 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 AMDHD1Q96NU7 426 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 OR51I1Q9H343 314 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 DSN1Q9H410 356 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 RNF167Q9H6Y7 350 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 TAS2R7Q9NYW3 318 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 TMEM247A6NEH6 219 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 OR52A4PA6NMU1 304 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 GPR89AB7ZAQ6 455 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 SOX14O95416 240 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 ADAP00813 363 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 GPR89BP0CG08 455 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 FEN1P39748 380 aaKnown RBP18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 BCL6P41182 706 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 GSTM5P46439 218 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 DOC2BQ14184 412 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 MLC1Q15049 377 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 TRIM16LQ309B1 348 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 ARMCX4Q5H9R4 360 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 MCFD2Q8NI22 146 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 OTUB1Q96FW1 271 aaPredicted RBP18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 OR51E2Q9H255 320 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 C11orf16Q9NQ32 467 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 SEC14L3Q9UDX4 400 aa18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 MDC1Q14676 2089 aaKnown RBP18.49■□□□□ 0.55
CDC42EP1-201ENST00000249014 KPNA4O00629 521 aaPredicted RBP18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 DDX5P17844 614 aaKnown RBP18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 HYAL2Q12891 473 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 ENPP2Q13822 863 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 DCST1Q5T197 706 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 RAB42Q8N4Z0 105 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 RNF217Q8TC41 542 aa18.48■□□□□ 0.55
CDC42EP1-201ENST00000249014 XAGE5Q8WWM1 108 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms