RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 RASAL1O95294 804 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 CRYABP02511 175 aaKnown RBP11.88□□□□□ -0.51
VPREB3-201ENST00000248948 IGKV3-11P04433 115 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 EDN3P14138 238 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 TNNI3P19429 210 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 GNLYP22749 145 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 CD96P40200 585 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 UQCRFS1P47985 274 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 CYB561P49447 251 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 HLCSP50747 726 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 SLC48A1Q6P1K1 146 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 GALNT18Q6P9A2 607 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 RNF165Q6ZSG1 346 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 CROCCP2Q86T23 111 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 OR5L2Q8NGL0 311 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 NUBPLQ8TB37 319 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 ZNF721Q8TF20 911 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 NR4A3Q92570 626 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 RBM18Q96H35 190 aaKnown RBP11.88□□□□□ -0.51
VPREB3-201ENST00000248948 SIGLEC12Q96PQ1 595 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 KCNA7Q96RP8 456 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 FAIM2Q9BWQ8 316 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 SHCBP1LQ9BZQ2 653 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 OR8D2Q9GZM6 311 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 OLAHQ9NV23 265 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 SIRT5Q9NXA8 310 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 ANKRD10Q9NXR5 420 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 LRFN1Q9P244 771 aa11.88□□□□□ -0.51
VPREB3-201ENST00000248948 YARS2Q9Y2Z4 477 aaKnown RBP11.88□□□□□ -0.51
VPREB3-201ENST00000248948 CROCCQ5TZA2 2017 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 POLEQ07864 2286 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 ASPDHA6ND91 283 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 GOLGA6L10A6NI86 522 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 GLOD5A6NK44 160 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 TYROBPO43914 113 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 PCDH7O60245 1069 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 NME2P1O60361 137 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 TRIM13O60858 407 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 SLC25A12O75746 678 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 RSL1D1O76021 490 aaKnown RBP11.87□□□□□ -0.51
VPREB3-201ENST00000248948 CBX6O95503 412 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 SLC35E2P0CK97 266 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 UROSP10746 265 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 NME2P22392 152 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 PIK3R1P27986 724 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 TIA1P31483 386 aaKnown RBP eCLIP11.87□□□□□ -0.51
VPREB3-201ENST00000248948 SERPINB5P36952 375 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 SSR4P51571 173 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 FOXA1P55317 472 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 RNF4P78317 190 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 ACSM2AQ08AH3 577 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 NR6A1Q15406 480 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 ACSM2BQ68CK6 577 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 ZNF324BQ6AW86 544 aaPredicted RBP11.87□□□□□ -0.51
VPREB3-201ENST00000248948 TRIM46Q7Z4K8 759 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 C10orf107Q8IVU9 208 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 OR4N5Q8IXE1 308 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 FAM26EQ8N5C1 309 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 FAM98AQ8NCA5 519 aaKnown RBP11.87□□□□□ -0.51
VPREB3-201ENST00000248948 DNAJB8Q8NHS0 232 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 TCP10LQ8TDR4 215 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 CHTF18Q8WVB6 975 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 SREK1Q8WXA9 508 aaKnown RBP11.87□□□□□ -0.51
VPREB3-201ENST00000248948 TMEM125Q96AQ2 219 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 C11orf24Q96F05 449 aaPredicted RBP11.87□□□□□ -0.51
VPREB3-201ENST00000248948 METTL2AQ96IZ6 378 aaKnown RBP11.87□□□□□ -0.51
VPREB3-201ENST00000248948 FAM111AQ96PZ2 611 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 TAAR6Q96RI8 345 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 C12orf65Q9H3J6 166 aaKnown RBP11.87□□□□□ -0.51
VPREB3-201ENST00000248948 SSU72Q9NP77 194 aaKnown RBP11.87□□□□□ -0.51
VPREB3-201ENST00000248948 MYOTQ9UBF9 498 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 TIMM22Q9Y584 194 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 PCDHA9Q9Y5H5 950 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 ZGRF1Q86YA3 2104 aa11.87□□□□□ -0.51
VPREB3-201ENST00000248948 ANKUB1A6NFN9 424 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 TMEM200CA6NKL6 621 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 OR6C76A6NM76 312 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 NPIPB8E9PQR5 432 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 RGS16O15492 202 aaPredicted RBP11.86□□□□□ -0.51
VPREB3-201ENST00000248948 PRKNO60260 465 aaPredicted RBP11.86□□□□□ -0.51
VPREB3-201ENST00000248948 NPHS1O60500 1241 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 ATP1B1P05026 303 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 SP1P08047 785 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 NEFHP12036 1026 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 CHN1P15882 459 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 PRPH2P23942 346 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 TDGF1P3P51864 188 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 HK2P52789 917 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 MRPL49Q13405 166 aaKnown RBP11.86□□□□□ -0.51
VPREB3-201ENST00000248948 ELOAQ14241 798 aaKnown RBP11.86□□□□□ -0.51
VPREB3-201ENST00000248948 IMPG1Q17R60 797 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 MPEG1Q2M385 716 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 C6orf163Q5TEZ5 329 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 ZNF468Q5VIY5 522 aaPredicted RBP11.86□□□□□ -0.51
VPREB3-201ENST00000248948 FAM219BQ5XKK7 198 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 SPINK14Q6IE38 97 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 GALNT12Q8IXK2 581 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 CYP4Z2PQ8N1L4 340 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 TMEM156Q8N614 296 aa11.86□□□□□ -0.51
VPREB3-201ENST00000248948 OR4K14Q8NGD5 310 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms