RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ZNF750Q32MQ0 723 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 PLAG1Q6DJT9 500 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 PDZD3Q86UT5 571 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 KBTBD8Q8NFY9 601 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 SETD7Q8WTS6 366 aaKnown RBP24.24■■□□□ 1.47
RAB40C-201ENST00000248139 KLK6Q92876 244 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 UCK2Q9BZX2 261 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 SEMA3GQ9NS98 782 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 ERVK13-1Q9NX77 482 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 TMCC3Q9ULS5 477 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 OR1A2Q9Y585 309 aa24.24■■□□□ 1.47
RAB40C-201ENST00000248139 CYP7B1O75881 506 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 HOXB3P14651 431 aaPredicted RBP24.23■■□□□ 1.47
RAB40C-201ENST00000248139 KELP23276 732 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 LIMK1P53667 647 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 UNC5DQ6UXZ4 953 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 NCCRP1Q6ZVX7 275 aaPredicted RBP24.23■■□□□ 1.47
RAB40C-201ENST00000248139 TCEANCQ8N8B7 351 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 SPPL3Q8TCT6 385 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 SLC7A13Q8TCU3 470 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 UBE2E3Q969T4 207 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 TRPC4Q9UBN4 977 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 ICKQ9UPZ9 632 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 EYSQ5T1H1 3165 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 TARDBPQ13148 414 aaKnown RBP eCLIP24.23■■□□□ 1.47
RAB40C-201ENST00000248139 SELENBP1Q13228 472 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 ELOAQ14241 798 aaKnown RBP24.23■■□□□ 1.47
RAB40C-201ENST00000248139 DCST1Q5T197 706 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 FAM46DQ8NEK8 389 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 TRMT61AQ96FX7 289 aaKnown RBP24.23■■□□□ 1.47
RAB40C-201ENST00000248139 LINC00615Q96LM1 132 aaPredicted RBP24.23■■□□□ 1.47
RAB40C-201ENST00000248139 DYRK4Q9NR20 520 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 KCND3Q9UK17 655 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 IRAK3Q9Y616 596 aa24.23■■□□□ 1.47
RAB40C-201ENST00000248139 PNMA8CA0A1B0GUJ8 204 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 C17orf113A0A1B0GUU1 675 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 IGLON5A6NGN9 336 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 P2RY2P41231 377 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 CLCNKAP51800 687 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 NKX2-5P52952 324 aaPredicted RBP24.22■■□□□ 1.47
RAB40C-201ENST00000248139 CAMK1Q14012 370 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 TCEA2Q15560 299 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 FBXO43Q4G163 708 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 TMC5Q6UXY8 1006 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 HCAR2Q8TDS4 363 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 OR5P2Q8WZ92 322 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 OTUB2Q96DC9 234 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 OPALINQ96PE5 141 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 C17orf62Q9BQA9 187 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 SEC14L3Q9UDX4 400 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 WDR37Q9Y2I8 494 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 A0A1W2PS29 197 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 NTN1O95631 604 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 CCT3P49368 545 aaKnown RBP24.22■■□□□ 1.47
RAB40C-201ENST00000248139 EIF4HQ15056 248 aaKnown RBP24.22■■□□□ 1.47
RAB40C-201ENST00000248139 DESI1Q6ICB0 168 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 IKBIPQ70UQ0 350 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 DCUN1D3Q8IWE4 304 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 MINDY2Q8NBR6 621 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 CXorf40AQ8TE69 158 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 SMPDL3AQ92484 453 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 TREX2Q9BQ50 279 aaPredicted RBP24.22■■□□□ 1.47
RAB40C-201ENST00000248139 QRSL1Q9H0R6 528 aaKnown RBP24.22■■□□□ 1.47
RAB40C-201ENST00000248139 ANKRA2Q9H9E1 313 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 AHSPQ9NZD4 102 aa24.22■■□□□ 1.47
RAB40C-201ENST00000248139 VCANP13611 3396 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 A0A0C4DFX4 3053 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 EFCAB10A6NFE3 127 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 CAPN5O15484 640 aaPredicted RBP24.21■■□□□ 1.47
RAB40C-201ENST00000248139 LRRTM2O43300 516 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 ZNF367Q7RTV3 350 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 UBE3DQ7Z6J8 389 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 LINC01555Q8NAE3 123 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 CRELD1Q96HD1 420 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 SLC6A18Q96N87 628 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 AIF1LQ9BQI0 150 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 CDCA4Q9BXL8 241 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 TPK1Q9H3S4 243 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 OSGEPL1Q9H4B0 414 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 HHATLQ9HCP6 504 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 TVP23BQ9NYZ1 205 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 DEC1Q9P2X7 70 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 SLC9A3R1O14745 358 aaPredicted RBP24.21■■□□□ 1.47
RAB40C-201ENST00000248139 OSMP13725 252 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 HTRA4P83105 476 aaPredicted RBP24.21■■□□□ 1.47
RAB40C-201ENST00000248139 MADCAM1Q13477 382 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 ELAVL3Q14576 367 aaKnown RBP24.21■■□□□ 1.47
RAB40C-201ENST00000248139 HEPACAMQ14CZ8 416 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 ERN2Q76MJ5 926 aaKnown RBP24.21■■□□□ 1.47
RAB40C-201ENST00000248139 ETFBKMTQ8IXQ9 262 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 NXF2Q9GZY0 626 aaKnown RBP24.21■■□□□ 1.47
RAB40C-201ENST00000248139 NUAK2Q9H093 628 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 POU2F3Q9UKI9 436 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 GPR34Q9UPC5 381 aa24.21■■□□□ 1.47
RAB40C-201ENST00000248139 SPTBN5Q9NRC6 3674 aaKnown RBP24.21■■□□□ 1.47
RAB40C-201ENST00000248139 CCRL2O00421 344 aa24.2■■□□□ 1.47
RAB40C-201ENST00000248139 ADH1CP00326 375 aa24.2■■□□□ 1.47
RAB40C-201ENST00000248139 H1F0P07305 194 aaKnown RBP24.2■■□□□ 1.47
RAB40C-201ENST00000248139 XKP51811 444 aa24.2■■□□□ 1.47
RAB40C-201ENST00000248139 ZNF707Q96C28 371 aaPredicted RBP24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms