RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ZDHHC3Q9NYG2 299 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 IGKV6D-41A0A0C4DH26 115 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 ASGR1P07306 291 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 PVALBP20472 110 aaPredicted RBP7.21□□□□□ -1.25
RIF1-201ENST00000243326 POLR2IP36954 125 aaKnown RBP7.21□□□□□ -1.25
RIF1-201ENST00000243326 SH3BP2P78314 561 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 EMX2Q04743 252 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 ZNF367Q7RTV3 350 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 B3GNT8Q7Z7M8 397 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 LILRA2Q8N149 483 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 SH3BGRL2Q9UJC5 107 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 COPS3Q9UNS2 423 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 CSNK1G3Q9Y6M4 447 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 RNF13O43567 381 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 FUCA1P04066 466 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 MAGEA3P43357 314 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 OR4K13Q8NH42 304 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 TRMT10AQ8TBZ6 339 aaKnown RBP7.21□□□□□ -1.25
RIF1-201ENST00000243326 MED20Q9H944 212 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 CDH7Q9ULB5 785 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 RENP00797 406 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 CCND3P30281 292 aaPredicted RBP7.21□□□□□ -1.25
RIF1-201ENST00000243326 HNRNPDQ14103 355 aaKnown RBP7.21□□□□□ -1.25
RIF1-201ENST00000243326 ZNF674Q2M3X9 581 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 BOCQ9BWV1 1114 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 FZD8Q9H461 694 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 RGCCQ9H4X1 137 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 KLF11O14901 512 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 MUSKO15146 869 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 FLRT2O43155 660 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 IRAK2O43187 625 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 ANXA8P13928 327 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 SPNP16150 400 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 HSD11B1P28845 292 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 CDK5R2Q13319 367 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 COL28A1Q2UY09 1125 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 FCAMRQ8WWV6 532 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 TM4SF1P30408 202 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 LRR1Q96L50 414 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 F2RL3Q96RI0 385 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 ADAMTS10Q9H324 1103 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 KCMF1Q9P0J7 381 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 ZNF670-ZNF695F2Z2N8 137 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 ARAFP10398 606 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 ACPPP15309 386 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 MLF1P58340 268 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 BLOC1S3Q6QNY0 202 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 NRSN1Q8IZ57 195 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 GLB1L3Q8NCI6 653 aaPredicted RBP7.21□□□□□ -1.26
RIF1-201ENST00000243326 SORCS1Q8WY21 1168 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 GPN3Q9UHW5 284 aaPredicted RBP7.21□□□□□ -1.26
RIF1-201ENST00000243326 A0A1W2PQ09 198 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 H7BY64 318 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 PLGP00747 810 aaPredicted RBP7.21□□□□□ -1.26
RIF1-201ENST00000243326 ITGB8P26012 769 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 OR5D16Q8NGK9 328 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 ZBED6CLQ96FA7 236 aaPredicted RBP7.21□□□□□ -1.26
RIF1-201ENST00000243326 PRAP1Q96NZ9 151 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 C1QTNF7Q9BXJ2 289 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 RC3H2Q9HBD1 1191 aaKnown RBP7.21□□□□□ -1.26
RIF1-201ENST00000243326 REV1Q9UBZ9 1251 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 ANHXE9PGG2 379 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 AQP9O43315 295 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 POP7O75817 140 aaKnown RBP7.21□□□□□ -1.26
RIF1-201ENST00000243326 C8GP07360 202 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 CD3GP09693 182 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 GKN3PP0CG01 181 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 MSX1P28360 303 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 CAP1Q01518 475 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 MGAT3Q09327 533 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 TMEM69Q5SWH9 247 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 AMIGO3Q86WK7 504 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 LAX1Q8IWV1 398 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 NLGN4XQ8N0W4 816 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 S100A16Q96FQ6 103 aaKnown RBP7.21□□□□□ -1.26
RIF1-201ENST00000243326 GPATCH2Q9NW75 528 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 COL6A6A6NMZ7 2263 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 OGNP20774 298 aaKnown RBP7.21□□□□□ -1.26
RIF1-201ENST00000243326 ETV3P41162 512 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 ESX1Q8N693 406 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 MYLIPQ8WY64 445 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 DUS2Q9NX74 493 aaKnown RBP7.21□□□□□ -1.26
RIF1-201ENST00000243326 FETUBQ9UGM5 382 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 TMEM5Q9Y2B1 443 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 TFP02787 698 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 CHRNB1P11230 501 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 SOX4Q06945 474 aaPredicted RBP7.21□□□□□ -1.26
RIF1-201ENST00000243326 LRRC69Q6ZNQ3 347 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 SPARTQ8N0X7 666 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 OR2AJ1Q8NGZ0 328 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 CCDC107Q8WV48 283 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 CMTM7Q96FZ5 175 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 KLHL9Q9P2J3 617 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 WNT6Q9Y6F9 365 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 A0A096LPI6 279 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 HTR1AP08908 422 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 C21orf33P30042 268 aaPredicted RBP7.21□□□□□ -1.26
RIF1-201ENST00000243326 ELAVL2Q12926 359 aaKnown RBP7.21□□□□□ -1.26
RIF1-201ENST00000243326 MAP2K5Q13163 448 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 MFSD13AQ14CX5 517 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms