RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 ZNF682O95780 498 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 CFIP05156 583 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 ARAFP10398 606 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 ZNF26P17031 533 aaPredicted RBP17.11■□□□□ 0.33
VIM-201ENST00000224237 FEN1P39748 380 aaKnown RBP17.11■□□□□ 0.33
VIM-201ENST00000224237 OLR1P78380 273 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 TP53BP2Q13625 1128 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 LPAL2Q16609 132 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 NKG7Q16617 165 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 NDUFA9Q16795 377 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 NIPAL1Q6NVV3 410 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 BHLHB9Q6PI77 547 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 CBLL1Q75N03 491 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 EIF3MQ7L2H7 374 aaKnown RBP17.11■□□□□ 0.33
VIM-201ENST00000224237 KANSL1Q7Z3B3 1105 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 PLXDC1Q8IUK5 500 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 MOAP1Q96BY2 351 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 CSF3RQ99062 836 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 COQ10BQ9H8M1 238 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 PLCL2Q9UPR0 1127 aa17.11■□□□□ 0.33
VIM-201ENST00000224237 H0YJX3 145 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 CASC3O15234 703 aaKnown RBP17.1■□□□□ 0.33
VIM-201ENST00000224237 CLOCKO15516 846 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 C8orf89P0DMQ9 161 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 HSPA13P48723 471 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 CDK6Q00534 326 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 HLA-BQ31612 363 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 TMTC4Q5T4D3 741 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 ZBTB49Q6ZSB9 765 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 RABEPKQ7Z6M1 372 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 OR2I1PQ8NGU4 316 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 ZNF285Q96NJ3 590 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 C9orf16Q9BUW7 83 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 ASPSCR1Q9BZE9 553 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 C8orf4Q9NR00 106 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 ZCCHC3Q9NUD5 404 aaKnown RBP17.1■□□□□ 0.33
VIM-201ENST00000224237 B4GALT2O60909 372 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 CTSBP07858 339 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 CKMT2P17540 419 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 MAGEA8P43361 318 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 GABRA4P48169 554 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 MRPS35P82673 323 aaKnown RBP17.1■□□□□ 0.33
VIM-201ENST00000224237 EEF1A2Q05639 463 aaKnown RBP17.1■□□□□ 0.33
VIM-201ENST00000224237 DUSP2Q05923 314 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 ELOAQ14241 798 aaKnown RBP17.1■□□□□ 0.33
VIM-201ENST00000224237 ZNF750Q32MQ0 723 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
VIM-201ENST00000224237 TCTE1Q5JU00 501 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 SZRD1Q7Z422 152 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 CA13Q8N1Q1 262 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 LRRC25Q8N386 305 aaPredicted RBP17.1■□□□□ 0.33
VIM-201ENST00000224237 GALNT4Q8N4A0 578 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 OR4K14Q8NGD5 310 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 OR6C4Q8NGE1 309 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 NFKBIDQ8NI38 313 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 CEP76Q8TAP6 659 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 SAP25Q8TEE9 199 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 SLC35G5Q96KT7 338 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 ADPRHL2Q9NX46 363 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 THUMPD1Q9NXG2 353 aaKnown RBP17.1■□□□□ 0.33
VIM-201ENST00000224237 KLHL3Q9UH77 587 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 ANGPT4Q9Y264 503 aa17.1■□□□□ 0.33
VIM-201ENST00000224237 SAC3D1A6NKF1 404 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 DNAJB6O75190 326 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 UQCRBP14927 111 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 AQP1P29972 269 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 MAGEA2P43356 314 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 PRR5P85299 388 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 AMZ1Q400G9 498 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 GARNL3Q5VVW2 1013 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 PPP4R4Q6NUP7 873 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 TNFAIP8L2Q6P589 184 aaPredicted RBP17.09■□□□□ 0.33
VIM-201ENST00000224237 FKBP9P1Q75LS8 142 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 CCDC80Q76M96 950 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 GALNT10Q86SR1 603 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 EPHX4Q8IUS5 362 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 HORMAD2Q8N7B1 307 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 PACRGLQ8N7B6 248 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 OR56A1Q8NGH5 318 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 OR4C6Q8NH72 309 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 VPS50Q96JG6 964 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 A4GALTQ9NPC4 353 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 OAZ3Q9UMX2 235 aa17.09■□□□□ 0.33
VIM-201ENST00000224237 MN1Q10571 1320 aaPredicted RBP17.08■□□□□ 0.33
VIM-201ENST00000224237 A0A1W2PS29 197 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 SGK494L7N484 410 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 B4GAT1O43505 415 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 PRSS23O95084 383 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 CST1P01037 141 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 FHP07954 510 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 PNLIPP16233 465 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 RAB38P57729 211 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 RPS26P62854 115 aaKnown RBP17.08■□□□□ 0.33
VIM-201ENST00000224237 SIM1P81133 766 aaPredicted RBP17.08■□□□□ 0.33
VIM-201ENST00000224237 SHC2P98077 582 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 FAM53BQ14153 422 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 NRF1Q16656 503 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 TMEM107Q6UX40 140 aa17.08■□□□□ 0.33
VIM-201ENST00000224237 ZC3H7AQ8IWR0 971 aaKnown RBP17.08■□□□□ 0.33
VIM-201ENST00000224237 TTC29Q8NA56 475 aaPredicted RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms