RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 RHOP08100 348 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 SYN1P17600 705 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 S100A1P23297 94 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 AZGP1P25311 298 aaKnown RBP16.4■□□□□ 0.22
USB1-201ENST00000219281 NNMTP40261 264 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 HTR3AP46098 478 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 NTHL1P78549 312 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 NCF4Q15080 339 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 MEDAGQ5VYS4 303 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 CASP12Q6UXS9 341 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 TMIGD1Q6UXZ0 262 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 IKBIPQ70UQ0 350 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 LAX1Q8IWV1 398 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 CELF5Q8N6W0 485 aaKnown RBP16.4■□□□□ 0.22
USB1-201ENST00000219281 SPPL3Q8TCT6 385 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 POF1BQ8WVV4 589 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 BADQ92934 168 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 TMCO6Q96DC7 493 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 SLC6A18Q96N87 628 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 WFDC6Q9BQY6 131 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 ACAT2Q9BWD1 397 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 TSSK6Q9BXA6 273 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 POLR2J2Q9GZM3 115 aaKnown RBP16.4■□□□□ 0.22
USB1-201ENST00000219281 TPK1Q9H3S4 243 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 TDP1Q9NUW8 608 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 NPAP1Q9NZP6 1156 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 SEC14L4Q9UDX3 406 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 MGAT4BQ9UQ53 548 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 LINC00854A0A1B0GVQ3 168 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 K7ESM1 405 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 CAPN5O15484 640 aaPredicted RBP16.4■□□□□ 0.22
USB1-201ENST00000219281 LILRB5O75023 590 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 HBQ1P09105 142 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 MANFP55145 182 aaKnown RBP16.4■□□□□ 0.22
USB1-201ENST00000219281 ZNF91Q05481 1191 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 BAK1Q16611 211 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 ATAD3CQ5T2N8 411 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 SAXO2Q658L1 398 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 C12orf73Q69YU5 71 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 TMPRSS11AQ6ZMR5 421 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 SLC9B2Q86UD5 537 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 TRIM69Q86WT6 500 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 TCEANCQ8N8B7 351 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 OR4D11Q8NGI4 311 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 OR6F1Q8NGZ6 308 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 NEURL3Q96EH8 262 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 ZSWIM3Q96MP5 696 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 MND1Q9BWT6 205 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 POLR2J3Q9H1A7 115 aaKnown RBP16.4■□□□□ 0.22
USB1-201ENST00000219281 A4GALTQ9NPC4 353 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 STUB1Q9UNE7 303 aa16.4■□□□□ 0.22
USB1-201ENST00000219281 RPL36Q9Y3U8 105 aaKnown RBP16.4■□□□□ 0.22
USB1-201ENST00000219281 NOTCH4Q99466 2003 aa16.39■□□□□ 0.22
USB1-201ENST00000219281 CHD9Q3L8U1 2897 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 FAM47E-STBD1D6RA91 191 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 H1F0P07305 194 aaKnown RBP16.39■□□□□ 0.21
USB1-201ENST00000219281 PTPN2P17706 415 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 ENDOUP21128 410 aaKnown RBP16.39■□□□□ 0.21
USB1-201ENST00000219281 CAMK1Q14012 370 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 NDUFA5Q16718 116 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 TMEM201Q5SNT2 666 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 ARMC4Q5T2S8 1044 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 PARS2Q7L3T8 475 aaKnown RBP16.39■□□□□ 0.21
USB1-201ENST00000219281 MMAAQ8IVH4 418 aaKnown RBP16.39■□□□□ 0.21
USB1-201ENST00000219281 ADGRF3Q8IZF5 1079 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 IQCF1Q8N6M8 205 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 NANOGP1Q8N7R0 232 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 SP7Q8TDD2 431 aaPredicted RBP16.39■□□□□ 0.21
USB1-201ENST00000219281 C5AR2Q9P296 337 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 NDOR1Q9UHB4 597 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 N6AMT1Q9Y5N5 214 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 ZNF670-ZNF695F2Z2N8 137 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 FAAHO00519 579 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 PLPP1O14494 284 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 IDH3BO43837 385 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 SOD1P00441 154 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 CYP17A1P05093 508 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 TNNI3P19429 210 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 DDCP20711 480 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 METAP1P53582 386 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 MXD1Q05195 221 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 HSPB3Q12988 150 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 TARDBPQ13148 414 aaKnown RBP eCLIP16.39■□□□□ 0.21
USB1-201ENST00000219281 GPR50Q13585 617 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 TMEM240Q5SV17 173 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 PRAMEF14Q5SWL7 426 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 C6orf183Q5T699 404 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 PRAMEF13Q5VWM6 474 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 LIPKQ5VXJ0 399 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 PGBD2Q6P3X8 592 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 GDPGP1Q6ZNW5 385 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 SETD6Q8TBK2 473 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 UBE2E3Q969T4 207 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 EPHX3Q9H6B9 360 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 SEMA3GQ9NS98 782 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 TVP23BQ9NYZ1 205 aa16.39■□□□□ 0.21
USB1-201ENST00000219281 C5orf42Q9H799 3197 aa16.38■□□□□ 0.21
USB1-201ENST00000219281 HEPACAM2A8MVW5 462 aa16.38■□□□□ 0.21
USB1-201ENST00000219281 KPNA3O00505 521 aaPredicted RBP16.38■□□□□ 0.21
USB1-201ENST00000219281 B4GALT2O60909 372 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms