RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CKMT1AP12532 417 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 FEN1P39748 380 aaKnown RBP12.63□□□□□ -0.39
SRP54-201ENST00000216774 FRKP42685 505 aaPredicted RBP12.63□□□□□ -0.39
SRP54-201ENST00000216774 RUNX1T1Q06455 604 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 FOXD4Q12950 439 aaPredicted RBP12.63□□□□□ -0.39
SRP54-201ENST00000216774 TEAD2Q15562 447 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 ZNF77Q15935 545 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 ZNF362Q5T0B9 420 aaPredicted RBP12.63□□□□□ -0.39
SRP54-201ENST00000216774 TMPRSS11AQ6ZMR5 421 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 C6orf120Q7Z4R8 191 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 ZNF547Q8IVP9 402 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 UBQLNLQ8IYU4 475 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 ADGRF3Q8IZF5 1079 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 RAD51AP1Q96B01 352 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 TM4SF18Q96CE8 201 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 OTUB2Q96DC9 234 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 NUS1Q96E22 293 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 ZDHHC5Q9C0B5 715 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 NEK6Q9HC98 313 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 CREBZFQ9NS37 354 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 SNX11Q9Y5W9 270 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 LTBP2Q14767 1821 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 A8MU76 341 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 HMGN4O00479 90 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 KPNA3O00505 521 aaPredicted RBP12.63□□□□□ -0.39
SRP54-201ENST00000216774 RGS5O15539 181 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 SPINT1O43278 529 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 TPST2O60704 377 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 POP7O75817 140 aaKnown RBP12.63□□□□□ -0.39
SRP54-201ENST00000216774 PAPLNO95428 1278 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 KELP23276 732 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 BMPR1AP36894 532 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 HTR3AP46098 478 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 GSTM5P46439 218 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 PCBP4P57723 403 aaKnown RBP12.63□□□□□ -0.39
SRP54-201ENST00000216774 COX10Q12887 443 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 GPR50Q13585 617 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 SF3B4Q15427 424 aaKnown RBP eCLIP12.63□□□□□ -0.392e-8■■□□□ 14.5
SRP54-201ENST00000216774 RSBN1Q5VWQ0 802 aaPredicted RBP12.63□□□□□ -0.39
SRP54-201ENST00000216774 CD300LDQ6UXZ3 194 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 SPATC1Q76KD6 591 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 FAM26EQ8N5C1 309 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 ASB15Q8WXK1 588 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 SLC6A18Q96N87 628 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 TOX2Q96NM4 488 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 QRFPRQ96P65 431 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 TSSK6Q9BXA6 273 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 PELI2Q9HAT8 420 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 SEMA3GQ9NS98 782 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 ZNF221Q9UK13 617 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 SSR3Q9UNL2 185 aa12.63□□□□□ -0.39
SRP54-201ENST00000216774 A0A1W2PRQ8 180 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 K7ESM1 405 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 SH3BP5O60239 455 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 MOSPD3O75425 235 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 CXCL14O95715 111 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 TBX6O95947 436 aaPredicted RBP12.62□□□□□ -0.39
SRP54-201ENST00000216774 LGI1O95970 557 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 PRNPP04156 253 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 HBQ1P09105 142 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 CXCR2P25025 360 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 BSGP35613 385 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 NR4A2P43354 598 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 GPR1P46091 355 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 DGKEP52429 567 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 PSPHP78330 225 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 IFITM2Q01629 132 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 TLE2Q04725 743 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 DPTQ07507 201 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 NDUFA9Q16795 377 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 SPDYE7PQ495Y7 208 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 RAET1GQ6H3X3 334 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 DEF8Q6ZN54 512 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 NRARPQ7Z6K4 114 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 LINC00471Q8N535 108 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 OR6F1Q8NGZ6 308 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 GPR151Q8TDV0 419 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 SMPDL3AQ92484 453 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 ZBED6CLQ96FA7 236 aaPredicted RBP12.62□□□□□ -0.39
SRP54-201ENST00000216774 RSPO3Q9BXY4 272 aaPredicted RBP12.62□□□□□ -0.39
SRP54-201ENST00000216774 MS4A8Q9BY19 250 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 POLDIP3Q9BY77 421 aaKnown RBP12.62□□□□□ -0.39
SRP54-201ENST00000216774 OR2B2Q9GZK3 357 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 POLR2J2Q9GZM3 115 aaKnown RBP12.62□□□□□ -0.39
SRP54-201ENST00000216774 OR52A5Q9H2C5 316 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 SIRT3Q9NTG7 399 aaPredicted RBP12.62□□□□□ -0.39
SRP54-201ENST00000216774 SEC14L3Q9UDX4 400 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 DIMT1Q9UNQ2 313 aaKnown RBP12.62□□□□□ -0.39
SRP54-201ENST00000216774 ASF1AQ9Y294 204 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 MTCL1Q9Y4B5 1905 aaKnown RBP12.62□□□□□ -0.39
SRP54-201ENST00000216774 TTC36A6NLP5 189 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 MYL12BO14950 172 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 VEGFDO43915 354 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 SSX4O60224 188 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 IGFBP1P08833 259 aaPredicted RBP12.62□□□□□ -0.39
SRP54-201ENST00000216774 NKX2-5P52952 324 aaPredicted RBP12.62□□□□□ -0.39
SRP54-201ENST00000216774 TARDBPQ13148 414 aaKnown RBP eCLIP12.62□□□□□ -0.39
SRP54-201ENST00000216774 NFE2L1Q14494 772 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 ARMC4Q5T2S8 1044 aa12.62□□□□□ -0.39
SRP54-201ENST00000216774 KIAA1211LQ6NV74 962 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms